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PLM3_60_b1_sep16_scaffold_668

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_668_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2..1459)
DNA (1458bp) protein (486aa)
GTP-binding protein TypA Tax=Bacteria RepID=D8P868_9BACT
typA; GTP-binding protein TypA
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

1773..4037
DNA (2265bp) protein (755aa)
Penicillin-binding protein 1A {ECO:0000313|EMBL:CBK43699.1}; EC=2.4.2.- {ECO:0000313|EMBL:CBK43699.1};; EC=3.4.-.- {ECO:0000313|EMBL:CBK43699.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
mrcA; penicillin-binding protein 1A (EC:2.4.2.- 3.4.-.-)
Penicillin-binding protein 1A Tax=Candidatus Nitrospira defluvii RepID=D8P867_9BACT
PLM3_60_b1_sep16_scaffold_668_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(4079..4291)
DNA (213bp) protein (71aa)
Iron-sulfur cluster assembly protein IscX Tax=Candidatus Nitrospira defluvii RepID=D8P866_9BACT
iscX; iron-sulfur cluster assembly protein IscX
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_4
candidate division Zixibacteria, Bacteria

Not on your lists

comp(4306..4719)
DNA (414bp) protein (138aa)
2Fe-2S ferredoxin bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
2Fe-2S ferredoxin {ECO:0000313|EMBL:EQB62514.1}; species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
ferredoxin
PLM3_60_b1_sep16_scaffold_668_5
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4735..5055)
DNA (321bp) protein (107aa)
Chaperone protein HscA (Hsc66) Tax=Candidatus Nitrospira defluvii RepID=D8P865_9BACT
hscA; chaperone protein HscA
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_668_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5024..6436)
DNA (1413bp) protein (471aa)
Chaperone protein HscA (Hsc66) Tax=Candidatus Nitrospira defluvii RepID=D8P865_9BACT
hscA; chaperone protein HscA
Chaperone protein HscA (Hsc66) {ECO:0000313|EMBL:CBK43697.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_668_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6456..7178)
DNA (723bp) protein (241aa)
Co-chaperone protein HscB (Hsc20) Tax=Candidatus Nitrospira defluvii RepID=D8P864_9BACT
hscB; co-chaperone protein HscB
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_8
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7282..7635)
DNA (354bp) protein (118aa)
Iron-sulfur cluster assembly protein IscA Tax=Candidatus Nitrospira defluvii RepID=D8P863_9BACT
iscA; iron-sulfur cluster assembly protein IscA
Iron-sulfur cluster assembly protein IscA {ECO:0000313|EMBL:CBK43695.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_668_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(7668..8054)
DNA (387bp) protein (129aa)
Iron-sulfur cluster assembly protein IscU Tax=Candidatus Nitrospira defluvii RepID=D8P862_9BACT
iscU; iron-sulfur cluster assembly protein IscU
Iron-sulfur cluster assembly protein IscU {ECO:0000313|EMBL:CBK43694.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_668_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8101..9318)
DNA (1218bp) protein (406aa)
iscS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase Tax=Candidatus Nitrospira defluvii RepID=D8P861_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_11
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9315..9791)
DNA (477bp) protein (159aa)
Putative Transcription factor IscR Tax=Candidatus Nitrospira defluvii RepID=D8P860_9BACT
putative transcription factor IscR
Putative Transcription factor IscR {ECO:0000313|EMBL:CBK43692.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_668_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9993..10406
DNA (414bp) protein (138aa)
2Fe-2S ferredoxin Tax=Candidatus Nitrospira defluvii RepID=D8P859_9BACT
fdxB; 2Fe-2S ferredoxin
2Fe-2S ferredoxin {ECO:0000313|EMBL:CBK43691.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_668_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(10418..11125)
DNA (708bp) protein (236aa)
putative ferredoxin reductase (EC:1.18.1.-)
Putative Ferredoxin reductase {ECO:0000313|EMBL:CBK43690.1}; EC=1.18.1.- {ECO:0000313|EMBL:CBK43690.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Ferredoxin reductase Tax=Candidatus Nitrospira defluvii RepID=D8P858_9BACT
PLM3_60_b1_sep16_scaffold_668_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11323..12744
DNA (1422bp) protein (474aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8P856_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_trna_1
unknown

Not on your lists

12781..12851
DNA (71bp)
transferRNA Gln
PLM3_60_b1_sep16_scaffold_668_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12946..14649
DNA (1704bp) protein (568aa)
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Glutamine--tRNA ligase Tax=Candidatus Nitrospira defluvii RepID=D8P853_9BACT
PLM3_60_b1_sep16_scaffold_668_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(14686..14991)
DNA (306bp) protein (102aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P848_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43680.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_668_trna_2
unknown

Not on your lists

15318..15392
DNA (75bp)
transferRNA Glu
PLM3_60_b1_sep16_scaffold_668_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

15579..16676
DNA (1098bp) protein (366aa)
putative deoxyhypusine synthase (EC:2.5.1.46)
Putative Deoxyhypusine synthase Tax=Candidatus Nitrospira defluvii RepID=D8P815_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_18
RBG_16_Gamma2_64_10_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16793..17164
DNA (372bp) protein (124aa)
Class I peptide chain release factor Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U4R6_9CHLR
hypothetical protein
Tax=RBG_16_Gamma2_64_10_curated
PLM3_60_b1_sep16_scaffold_668_19
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

17213..17869
DNA (657bp) protein (219aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P814_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_668_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

17946..18224
DNA (279bp) protein (93aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P813_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_668_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

18252..18707
DNA (456bp) protein (152aa)
gapD; succinate semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate semialdehyde dehydrogenase Tax=Candidatus Nitrospira defluvii RepID=D8P812_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 23 items

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