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PLM3_60_b1_sep16_scaffold_734

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Displaying items 1-30 of 53 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_734_1
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(3..254)
DNA (252bp) protein (84aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3)
Putative Hybrid sensor histidine kinase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_b1_sep16_scaffold_734_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(313..1179)
DNA (867bp) protein (289aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAA8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40167.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_734_3
unknown

Not on your lists

1364..1798
DNA (435bp) protein (145aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_734_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1834..2763)
DNA (930bp) protein (310aa)
hypothetical protein bin=bin3_NC10 species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
PLM3_60_b1_sep16_scaffold_734_5
unknown

Not on your lists

2841..3056
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_734_6
RLO_Elusimicrobia_59_9, Elusimicrobia, Bacteria

Not on your lists

comp(3011..3721)
DNA (711bp) protein (237aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
Tax=RIFCSPLOWO2_12_FULL_Elusimicrobia_59_9_curated
PLM3_60_b1_sep16_scaffold_734_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(3747..5279)
DNA (1533bp) protein (511aa)
Radical SAM domain-containing protein bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Radical SAM domain-containing protein
Tax=CSP1_6_Rokubacteria
PLM3_60_b1_sep16_scaffold_734_8
unknown

Not on your lists

comp(5273..5500)
DNA (228bp) protein (76aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_734_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

5566..6156
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAA7_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_734_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6178..6693)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAA6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6715..7887)
DNA (1173bp) protein (391aa)
anmK; anhydro-N-acetylmuramic acid kinase (EC:2.7.1.-)
Anhydro-N-acetylmuramic acid kinase Tax=Candidatus Nitrospira defluvii RepID=D8PAA5_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_12
unknown

Not on your lists

comp(7884..8063)
DNA (180bp) protein (60aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_734_13
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

8103..9119
DNA (1017bp) protein (339aa)
Putative Manganese transport system, periplasmic binding component Tax=Candidatus Nitrospira defluvii RepID=D8PAA4_9BACT
putative manganese transport system, periplasmic-binding protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_734_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

9160..9939
DNA (780bp) protein (260aa)
mntB; manganese transport system ATPase (EC:3.6.3.-)
Manganese transport system, ATPase component Tax=Candidatus Nitrospira defluvii RepID=D8PAA3_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_15
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10031..10849
DNA (819bp) protein (273aa)
Manganese transport system, permease component Tax=Candidatus Nitrospira defluvii RepID=D8PAA2_9BACT
mntC; manganese transport system permease
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10904..11317)
DNA (414bp) protein (138aa)
Putative uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(11390..11698)
DNA (309bp) protein (103aa)
GCN5-like n-acetyltransferase (EC:2.3.1.-)
N-acetyltransferase, GCN5-related Tax=Candidatus Nitrospira defluvii RepID=D8PAA1_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

11802..12065
DNA (264bp) protein (88aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PAA0_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_19
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(12183..12605)
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PA99_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_734_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(12655..13695)
DNA (1041bp) protein (347aa)
rluD2; 23S rRNA pseudouridine synthase (EC:4.2.1.70 5.4.99.-)
Pseudouridine synthase Tax=Candidatus Nitrospira defluvii RepID=D8PA98_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13778..14368
DNA (591bp) protein (197aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PJI5_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_22
unknown

Not on your lists

14374..14637
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_734_23
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

14634..15005
DNA (372bp) protein (124aa)
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_734_24
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(15168..15635)
DNA (468bp) protein (156aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PH64_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK42601.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_734_25
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(15995..16420)
DNA (426bp) protein (142aa)
atpC; ATP synthase F1 subunit epsilon (EC:3.6.3.14)
ATP synthase epsilon chain Tax=Candidatus Nitrospira defluvii RepID=D8PA93_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_734_26
unknown

Not on your lists

comp(16399..16650)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_734_27
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16673..17356)
DNA (684bp) protein (228aa)
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta Tax=Candidatus Nitrospira defluvii RepID=D8PA92_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_28
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(17370..17999)
DNA (630bp) protein (210aa)
atpD; ATP synthase F1 subunit beta (EC:3.6.3.14)
ATP synthase subunit beta Tax=Candidatus Nitrospira defluvii RepID=D8PA92_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_734_29
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(18035..18907)
DNA (873bp) protein (291aa)
atpG; ATP synthase F1 subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain Tax=Candidatus Nitrospira defluvii RepID=D8PA91_9BACT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_734_30
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(19005..19547)
DNA (543bp) protein (181aa)
atpA; ATP synthase F1 subunit alpha (EC:3.6.3.14)
ATP synthase subunit alpha Tax=Candidatus Nitrospira defluvii RepID=D8PA90_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying items 1-30 of 53 in total

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