ggKbase home page

PLM3_60_b1_sep16_scaffold_5734

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_5734_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3..314
DNA (312bp) protein (104aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEZ7_9BACT
hypothetical protein
PLM3_60_b1_sep16_scaffold_5734_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

331..744
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PEZ8_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_5734_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

812..1201
DNA (390bp) protein (130aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P8J3_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_5734_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1264..2055)
DNA (792bp) protein (264aa)
lgt; prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase Tax=Candidatus Nitrospira defluvii RepID=D8PEZ9_9BACT
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_5734_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2209..2952
DNA (744bp) protein (248aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8P7J4_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43340.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_5734_6
Cyanothece sp. PCC 7424, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

3009..3293
DNA (285bp) protein (95aa)
Tetratricopeptide TPR_2 repeat protein Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KHB0_CYAP7
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACK69319.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7424) (Synechococcus sp. (strain ATCC; 29155)).;"
PLM3_60_b1_sep16_scaffold_5734_7
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3538..3798
DNA (261bp) protein (87aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii PF00_9BACT">RepID=D8PF00_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_5734_trna_1
unknown

Not on your lists

3943..4029
DNA (87bp)
transferRNA Leu
PLM3_60_b1_sep16_scaffold_5734_8
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4053..5123)
DNA (1071bp) protein (357aa)
Putative phage integrase Tax=Leptospirillum ferrodiazotrophum RepID=C6HW36_9BACT
Putative phage integrase {ECO:0000313|EMBL:EES53141.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;"
PLM3_60_b1_sep16_scaffold_5734_9
unknown

Not on your lists

comp(5125..5727)
DNA (603bp) protein (201aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_5734_10
unknown

Not on your lists

5882..6082
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_5734_11
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6072..6572
DNA (501bp) protein (167aa)
Phage/plasmid primase, P4 family Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CQW1_DESK7
phage/plasmid primase, P4 family
Phage/plasmid primase, P4 family {ECO:0000313|EMBL:AEG14986.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17).;"
PLM3_60_b1_sep16_scaffold_5734_12
Mycobacterium lentiflavum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6569..7807
DNA (1239bp) protein (413aa)
hypothetical protein, partial Tax=Mycobacterium tuberculosis RepID=UPI000379E457
PhiRv2 prophage protein {ECO:0000313|EMBL:CQD11923.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium lentiflavum.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_5734_13
unknown

Not on your lists

7764..8303
DNA (540bp) protein (180aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_5734_14

Not on your lists

8336..9034
DNA (699bp) protein (233aa)
Putative phage major capsid protein Tax=uncultured phage MedDCM-OCT-S05-C64 RepID=D6PFE3_9VIRU
Putative phage major capsid protein {ECO:0000313|EMBL:ADD94444.1}; species="Viruses; environmental samples.;" source="uncultured phage MedDCM-OCT-S05-C64.;"
Displaying 15 items

View Taxonomy