ggKbase home page

PLM3_60_b1_sep16_scaffold_3479

Search features with annotation key words

Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3479_1

Not on your lists

comp(186..2285)
DNA (2100bp) protein (700aa)
Elongation factor EF-G Tax=uncultured Acidobacteria bacterium RepID=H5S9F7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKN54500.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
translation elongation factor 2 (EF-2/EF-G)
PLM3_60_b1_sep16_scaffold_3479_2
unknown

Not on your lists

2588..2971
DNA (384bp) protein (128aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3479_3
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2982..3347
DNA (366bp) protein (122aa)
Putative uncharacterized protein bin=GWC2_CP_Nitrospirae-rel_42_7 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Tax=GWC2_Deltaproteobacteria_42_11_curated
PLM3_60_b1_sep16_scaffold_3479_4
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

Not on your lists

comp(3404..4546)
DNA (1143bp) protein (381aa)
cysteine desulfurase Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B55D6C
cysteine desulfurase
Tax=GWF2_Planctomycetes_40_8_curated
PLM3_60_b1_sep16_scaffold_3479_5
Terriglobus saanensis, Terriglobus, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4646..5953)
DNA (1308bp) protein (436aa)
Peptidase M48, Ste24p Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIX1_KORVE
peptidase M48 Ste24p
Peptidase M48 Ste24p {ECO:0000313|EMBL:ADV81164.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Terriglobus.;" source="Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4).;"
PLM3_60_b1_sep16_scaffold_3479_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(6269..7117)
DNA (849bp) protein (283aa)
Molybdopterin biosynthesis protein MoeB Tax=Brevibacillus borstelensis AK1 RepID=M8D7A5_9BACL
Dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis {ECO:0000313|EMBL:CDM64274.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
UBA/THIF-type NAD/FAD binding protein
PLM3_60_b1_sep16_scaffold_3479_7
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(7163..7597)
DNA (435bp) protein (145aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
Displaying 7 items

View Taxonomy