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PLM3_60_b1_sep16_scaffold_3691

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3691_1
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2..148)
DNA (147bp) protein (49aa)
Uncharacterized protein Tax=delta proteobacterium MLMS-1 RepID=Q1NJG2_9DELT
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
PLM3_60_b1_sep16_scaffold_3691_2
unknown

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343..552
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3691_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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690..2360
DNA (1671bp) protein (557aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XR36_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP33068.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_b1_sep16_scaffold_3691_4
unknown

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comp(2165..2812)
DNA (648bp) protein (216aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_3691_5
CG_Omnitr_06, Omnitrophica, Bacteria

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comp(2886..3638)
DNA (753bp) protein (251aa)
Fe-S osidoreductase
Putative Fe-S oxidoreductase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=CG_Omnitr_06
PLM3_60_b1_sep16_scaffold_3691_6
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

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3868..4347
DNA (480bp) protein (160aa)
Putative uncharacterized protein bin=GWC2_OP3-like_45_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
PLM3_60_b1_sep16_scaffold_3691_7
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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4344..5729
DNA (1386bp) protein (462aa)
tryptophanase (EC:4.1.99.1)
Tryptophanase {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909}; EC=4.1.99.1 {ECO:0000256|HAMAP-Rule:MF_00544, ECO:0000256|SAAS:SAAS00048909};; L-tryptophan indole-lyase {ECO:0000256|HAMAP-Rule:MF_00544}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
Tryptophanase Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MKB9_RHOM4
PLM3_60_b1_sep16_scaffold_3691_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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5761..6240
DNA (480bp) protein (160aa)
Putative uncharacterized protein bin=GWC2_Nitrospirae-rel_56_14 species=Cyanothece sp. CCY0110 genus=Cyanothece taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_b1_sep16_scaffold_3691_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(6257..6823)
DNA (567bp) protein (189aa)
Hemerythrin HHE cation binding domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q023C7_SOLUE
hemerythrin HHE cation binding domain-containing protein
Hemerythrin HHE cation binding domain protein {ECO:0000313|EMBL:ABJ83919.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_3691_10
RLO_PLX_64_10, Bacteria

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comp(6873..7073)
DNA (201bp) protein (67aa)
Protein of unknown function (DUF2892)
Putative uncharacterized protein bin=GWA2_Elusimicrobia_69_24 species=Muricauda ruestringensis genus=Muricauda taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_3691_11
RBG_13_Deltaproteobacteria_53_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7070..7951)
DNA (882bp) protein (294aa)
Cation or drug efflux system protein bin=GWC2_Proteo_65_14_Ab886 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Cation/multidrug efflux pump
Tax=RBG_13_Deltaproteobacteria_53_10_curated
Displaying 11 items

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