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PLM3_60_b1_sep16_scaffold_8054

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_8054_1
unknown

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1..393
DNA (393bp) protein (131aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_8054_2
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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comp(305..1231)
DNA (927bp) protein (309aa)
DNA ligase D/DNA polymerase LigD {ECO:0000313|EMBL:KID31681.1}; EC=6.5.1.1 {ECO:0000313|EMBL:KID31681.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] bin=bin9_gal15 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
DNA ligase D/DNA polymerase LigD
PLM3_60_b1_sep16_scaffold_8054_3
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(1247..2305)
DNA (1059bp) protein (353aa)
Amino acid permease-associated region Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01N99_SOLUE
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ABJ82825.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_8054_4
GWB2_Nitrospirae_47_37_curated, Nitrospirae, Bacteria

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comp(2614..3210)
DNA (597bp) protein (199aa)
RNA polymerase sigma factor bin=GWB2_Nitrospirae_rel_47_37 species=Limnobacter sp. MED105 genus=Limnobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
RNA polymerase ECF-type sigma factor
Tax=GWB2_Nitrospirae_47_37_curated
PLM3_60_b1_sep16_scaffold_8054_5
Caldithrix abyssi, Caldithrix, Bacteria

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comp(3213..4631)
DNA (1419bp) protein (473aa)
Membrane protein involved in aromatic hydrocarbon degradation Tax=Caldithrix abyssi DSM 13497 RepID=H1XWB7_9BACT
Membrane protein involved in aromatic hydrocarbon degradation {ECO:0000313|EMBL:EHO40699.1}; Flags: Precursor;; species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_8054_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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4695..5300
DNA (606bp) protein (202aa)
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_8054_7
Microbacterium sp. MEJ108Y, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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comp(5398..6633)
DNA (1236bp) protein (412aa)
PDK domain-containing protein, partial Tax=Serinicoccus profundi RepID=UPI000255E570
Contig_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIP95024.1}; species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MEJ108Y.;"
PDK domain-containing protein
Displaying 7 items

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