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PLM3_60_b1_sep16_scaffold_101

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_101_1
RLO_RIF02_62_27, RIF2, Bacteria

Not on your lists

554..1033
DNA (480bp) protein (160aa)
Phosphohistidine phosphatase, SixA Tax=Roseiflexus sp. (strain RS-1) RepID=A5UV59_ROSS1
phosphohistidine phosphatase SixA
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_60_b1_sep16_scaffold_101_2
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

1259..2797
DNA (1539bp) protein (513aa)
putative exopolyphosphatase (EC:3.6.1.11); K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] bin=CNBR_ACIDO species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative exopolyphosphatase (EC:3.6.1.11)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_b1_sep16_scaffold_101_3
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

2905..4437
DNA (1533bp) protein (511aa)
Ppx/GppA phosphatase bin=GWA2_OP3_52_12 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
exopolyphosphatase
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_101_4
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

4476..6488
DNA (2013bp) protein (671aa)
polyphosphate kinase (EC:2.7.4.1)
polyphosphate kinase Tax=Desulfitobacterium hafniense RepID=UPI00037BB7BB
Tax=CG_Arma_01
PLM3_60_b1_sep16_scaffold_101_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(6501..7964)
DNA (1464bp) protein (488aa)
Radical SAM domain protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V42_SOLUE
radical SAM domain-containing protein
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_b1_sep16_scaffold_101_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

8434..10194
DNA (1761bp) protein (587aa)
Putative uncharacterized protein Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IMI6_KORVE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABF41914.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_60_b1_sep16_scaffold_101_7
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10317..11180
DNA (864bp) protein (288aa)
CHAD domain containing protein Tax=Geobacter sp. (strain M18) RepID=E8WJU3_GEOS8
CHAD domain-containing protein
CHAD domain containing protein {ECO:0000313|EMBL:ADW14706.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sp. (strain M18).;"
PLM3_60_b1_sep16_scaffold_101_8
unknown

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11428..11694
DNA (267bp) protein (89aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_101_9
unknown

Not on your lists

comp(11610..11906)
DNA (297bp) protein (99aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_101_10
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

Not on your lists

comp(11988..12425)
DNA (438bp) protein (146aa)
hypothetical protein Tax=Verrucomicrobium sp. 3C RepID=UPI000363A8DA
hypothetical protein
Tax=RBG_13_Spirochaetes_68_11_curated
PLM3_60_b1_sep16_scaffold_101_11
GWA2_RIF01_43_8_curated, RIF1, Bacteria

Not on your lists

comp(12422..12715)
DNA (294bp) protein (98aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_24 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=GWA2_RIF01_43_8_curated
PLM3_60_b1_sep16_scaffold_101_12
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(12867..14069)
DNA (1203bp) protein (401aa)
Uncharacterized protein bin=GWF2_Ignavibacteria_35_20 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
phytochrome sensor protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
PLM3_60_b1_sep16_scaffold_101_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(14311..15069)
DNA (759bp) protein (253aa)
Shikimate kinase Tax=Sorangium cellulosum So0157-2 RepID=S4XPN7_SORCE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_101_14
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15148..16770
DNA (1623bp) protein (541aa)
crotonase (EC:4.2.1.17)
Crotonase {ECO:0000313|EMBL:AGP34390.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AGP34390.1};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
Crotonase Tax=Sorangium cellulosum So0157-2 RepID=S4XRA8_SORCE
PLM3_60_b1_sep16_scaffold_101_15
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16858..18282
DNA (1425bp) protein (475aa)
Benzoyl-CoA oxygenase, B subunit Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXF5_HALO1
benzoyl-CoA oxygenase subunit beta
Benzoyl-CoA oxygenase, B subunit {ECO:0000313|EMBL:ACY17710.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
PLM3_60_b1_sep16_scaffold_101_16
GWA2_Ignavibacteriae_55_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

18393..19448
DNA (1056bp) protein (352aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Fructose-bisphosphate aldolase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEU9_CHLTF
Tax=GWA2_Ignavibacteriae_55_25_curated
PLM3_60_b1_sep16_scaffold_101_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists


19561..19752
DNA (192bp) protein (64aa)
50S ribosomal protein L28 bin=GWC2_Methylomirabilis_70_16 species=Alicyclobacillus acidocaldarius genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rpmB; 50S ribosomal protein L28
Tax=RBG_16_Gemmatimonadetes_66_8_curated
PLM3_60_b1_sep16_scaffold_101_18
Eimeria mitis, Eimeria, Eucoccidiorida, Coccidia, Apicomplexa, Eukaryota

Not on your lists

comp(19844..20503)
DNA (660bp) protein (220aa)
Uncharacterized protein Tax=Eimeria mitis RepID=U6JMX5_9EIME
Uncharacterized protein {ECO:0000313|EMBL:CDJ26895.1}; species="Eukaryota; Alveolata; Apicomplexa; Conoidasida; Coccidia; Eucoccidiorida; Eimeriorina; Eimeriidae; Eimeria.;" source="Eimeria mitis.;"
Emm cell surface protein CspZ.2
PLM3_60_b1_sep16_scaffold_101_19
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

20658..21266
DNA (609bp) protein (203aa)
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor bin=GWC2_TM7_48_9 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_101_20
Nitrospina gracilis, Nitrospina, Nitrospinales, Nitrospinia, Nitrospinae, Bacteria

Not on your lists

21407..22582
DNA (1176bp) protein (392aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; species="Bacteria; Nitrospinae; Nitrospinia; Nitrospinales; Nitrospinaceae; Nitrospina.;" source="Nitrospina gracilis (strain 3/211).;"
DNA polymerase IV Tax=Nitrospina gracilis 3/211 RepID=M1Z9H3_9BACT
DNA-directed DNA polymerase
PLM3_60_b1_sep16_scaffold_101_21
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

22835..24265
DNA (1431bp) protein (477aa)
membrane protein involved in aromatic hydrocarbon degradation bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
putative hemin receptor
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3_60_b1_sep16_scaffold_101_22
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

24285..25850
DNA (1566bp) protein (522aa)
Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
PLM3_60_b1_sep16_scaffold_101_23
RBG_16_RIF03_38_11_curated, RIF3, Bacteria

Not on your lists

25860..26684
DNA (825bp) protein (275aa)
hypothetical protein bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
Tax=RBG_16_RIF03_38_11_curated
PLM3_60_b1_sep16_scaffold_101_24
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(26689..30981)
DNA (4293bp) protein (1431aa)
Serine/threonine protein kinase Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B4B8_HERA2
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ABX02675.1}; species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
PLM3_60_b1_sep16_scaffold_101_25
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31253..32482)
DNA (1230bp) protein (410aa)
Chitinase Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W628_9EURY
chitinase
Chitinase {ECO:0000313|EMBL:AGN02077.1}; species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
PLM3_60_b1_sep16_scaffold_101_26
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32621..33331)
DNA (711bp) protein (237aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MFD1_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE70278.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
Displaying 26 items

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