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PLM3_60_b1_sep16_scaffold_335

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Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_335_1
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(102..587)
DNA (486bp) protein (162aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RU4_SOLUE
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_335_2
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

1265..2092
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=candidate division ZIXI bacterium RBG-1 RepID=T0LGF4_9BACT
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_335_3
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(2073..2666)
DNA (594bp) protein (198aa)
molybdenum cofactor biosynthesis protein; K07141 molybdenum cofactor cytidylyltransferase [EC:2.7.7.76] bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
MobA-like protein
Tax=RBG_16_Chloroflexi_47_49_curated
PLM3_60_b1_sep16_scaffold_335_4
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2801..3313
DNA (513bp) protein (171aa)
UPI0003D1C3B0 related cluster Tax=unknown RepID=UPI0003D1C3B0
probabable oxidoreductase
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_60_b1_sep16_scaffold_335_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

3345..4172
DNA (828bp) protein (276aa)
4-hydroxybenzoyl-CoA reductase, alpha subunit {ECO:0000313|EMBL:CDM65155.1}; EC=1.3.7.9 {ECO:0000313|EMBL:CDM65155.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Putative FAD-binding oxidoreductase (Fragment) Tax=Clostridia bacterium enrichment culture clone BF RepID=D8WWD8_9FIRM
4-hydroxybenzoyl-CoA reductase, alpha subunit
PLM3_60_b1_sep16_scaffold_335_6
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4121..5521
DNA (1401bp) protein (467aa)
4-hydroxybenzoyl-CoA reductase, alpha subunit {ECO:0000313|EMBL:CDM65155.1}; EC=1.3.7.9 {ECO:0000313|EMBL:CDM65155.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
pth:PTH_1538 CoxL; aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
PLM3_60_b1_sep16_scaffold_335_7
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

5502..6455
DNA (954bp) protein (318aa)
Molybdopterin dehydrogenase, FAD-binding protein Tax=Plesiocystis pacifica SIR-1 RepID=A6GFV6_9DELT bin=16ft_combo_ws3_JS1 species=Plesiocystis pacifica genus=Plesiocystis taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
molybdopterin dehydrogenase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_b1_sep16_scaffold_335_8
unknown

Not on your lists

6452..6928
DNA (477bp) protein (159aa)
hypothetical protein Tax=Marinimicrobia bacterium JGI 0000059-L03 RepID=UPI00037FAC86
PLM3_60_b1_sep16_scaffold_335_9
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

6928..8928
DNA (2001bp) protein (667aa)
molybdopterin oxidoreductase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
molybdopterin oxidoreductase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_b1_sep16_scaffold_335_10
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(9121..10098)
DNA (978bp) protein (326aa)
PREDICTED: serine racemase-like isoform X3 Tax=Aplysia californica RepID=UPI0003593F8F
Pyridoxal-5'-phosphate-dependent protein beta subunit
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_b1_sep16_scaffold_335_11
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

10239..11114
DNA (876bp) protein (292aa)
Molybdopterin dehydrogenase FAD-binding Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TQ75_9CHLR
Molybdopterin dehydrogenase FAD-binding {ECO:0000313|EMBL:EFH85723.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
nicotine dehydrogenase chain A
PLM3_60_b1_sep16_scaffold_335_12
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

11116..11583
DNA (468bp) protein (156aa)
(2Fe-2S)-binding domain protein Tax=Sulfolobus solfataricus (strain 98/2) RepID=D0KUI1_SULS9
(2Fe-2S)-binding domain-containing protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_b1_sep16_scaffold_335_13
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11611..13956
DNA (2346bp) protein (782aa)
Carbon-monoxide dehydrogenase, large subunit Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGS3_RHOM4
Carbon-monoxide dehydrogenase, large subunit {ECO:0000313|EMBL:ACY49636.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
carbon-monoxide dehydrogenase, large subunit
PLM3_60_b1_sep16_scaffold_335_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13975..14643
DNA (669bp) protein (223aa)
Carbon monoxide dehydrogenase subunit G Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MGS4_RHOM4
carbon monoxide dehydrogenase subunit G
Carbon monoxide dehydrogenase subunit G {ECO:0000313|EMBL:ACY49637.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10); (Rhodothermus obamensis).;"
PLM3_60_b1_sep16_scaffold_335_15
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14747..15625
DNA (879bp) protein (293aa)
ATPase associated with various cellular activities AAA_3 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L786_HALH1
ATPase
ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:AEE53113.1}; species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767; / O).;"
PLM3_60_b1_sep16_scaffold_335_16
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

15638..16765
DNA (1128bp) protein (376aa)
VWA containing CoxE family protein Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SLF4_RHOMR
VWA containing CoxE family protein
VWA containing CoxE family protein {ECO:0000313|EMBL:AEN74671.1}; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM3_60_b1_sep16_scaffold_335_17
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

16758..17678
DNA (921bp) protein (307aa)
YHS domain-containing protein Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4L788_HALH1
hypothetical protein
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_b1_sep16_scaffold_335_18
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17688..18800
DNA (1113bp) protein (371aa)
hypothetical protein Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI00036A5F50
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:CCK79682.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfobacula toluolica (strain DSM 7467 / Tol2).;"
PLM3_60_b1_sep16_scaffold_335_19
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18807..19973
DNA (1167bp) protein (389aa)
xanthine dehydrogenase (EC:1.17.1.4)
Xanthine dehydrogenase {ECO:0000313|EMBL:AFZ12371.1}; EC=1.17.1.4 {ECO:0000313|EMBL:AFZ12371.1};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
hypothetical protein Tax=Mastigocladopsis repens RepID=UPI0002DFD81D
PLM3_60_b1_sep16_scaffold_335_20
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19970..21193
DNA (1224bp) protein (408aa)
Cysteine desulfurase bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
SufS subfamily cysteine desulfurase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
PLM3_60_b1_sep16_scaffold_335_21
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

21193..21642
DNA (450bp) protein (150aa)
hypothetical protein bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_335_22
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

comp(21656..22498)
DNA (843bp) protein (281aa)
Ornithine cyclodeaminase family protein Tax=Staphylococcus epidermidis NIHLM008 RepID=J0HWL6_STAEP
hypothetical protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_60_b1_sep16_scaffold_335_23
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(22506..24398)
DNA (1893bp) protein (631aa)
Leukotriene A-4 hydrolase (LTA-4 hydrolase) (LeukotrieneA(4) hydrolase) bin=GWC2_Ignavibacteria_56_12 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
aminopeptidase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_60_b1_sep16_scaffold_335_24

Not on your lists

comp(24526..25650)
DNA (1125bp) protein (375aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UHK8_MYXSD
Uncharacterized protein {ECO:0000313|EMBL:AIF09379.1}; Flags: Fragment;; species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_36_F10.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_335_25
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(25780..27318)
DNA (1539bp) protein (513aa)
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lnt; Apolipoprotein N-acyltransferase (ALP N-acyltransferase) (EC:2.3.1.-)
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_335_26
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(27315..29003)
DNA (1689bp) protein (563aa)
Type II secretion system protein E Tax=Desulfotomaculum nigrificans DSM 574 RepID=F0DKM1_9FIRM
type II secretion system protein E
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_335_27
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(29006..29509)
DNA (504bp) protein (168aa)
hypothetical protein, partial Tax=Xanthomonas sacchari RepID=UPI000262A802
sporulation protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_b1_sep16_scaffold_335_28
Leptolyngbya sp. PCC 7376, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(29633..30265)
DNA (633bp) protein (211aa)
Uncharacterized protein Tax=Leptolyngbya sp. PCC 7376 RepID=K9PYP2_9CYAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY37612.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7376.;"
PLM3_60_b1_sep16_scaffold_335_29
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(30530..31003)
DNA (474bp) protein (158aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027Q9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82748.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_335_30
RBG_13_Deltaproteobacteria_52_11b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31000..31515)
DNA (516bp) protein (172aa)
Transcriptional regulator, MerR family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q027R0_SOLUE
MerR family transcriptional regulator
Tax=RBG_13_Deltaproteobacteria_52_11b_curated
Displaying items 1-30 of 32 in total

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