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PLM3_60_b1_sep16_scaffold_449

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_449_1
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

comp(3..1826)
DNA (1824bp) protein (608aa)
Uncharacterized protein Tax=Phycisphaera mikurensis (strain NBRC 102666 / KCTC 22515 / FYK2301M01) RepID=I0IHC4_PHYMF bin=16ft_combo_ws3_JS1 species=Phycisphaera mikurensis genus=Phycisphaera taxon_order=Phycisphaerales taxon_class=Phycisphaerae phylum=Planctomycetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
hypothetical protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_60_b1_sep16_scaffold_449_2
Candidatus Brocadia sinica, Candidatus Brocadia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

1924..2643
DNA (720bp) protein (240aa)
pgl; 6-phosphogluconolactonase (EC:3.1.1.31)
6-phosphogluconolactonase Tax=planctomycete KSU-1 RepID=I3IHX1_9PLAN
6-phosphogluconolactonase/glucosamine-6-phosphate isomerase/deaminase {ECO:0000313|EMBL:GAN34664.1}; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Brocadia.;" source="Candidatus Brocadia sinica JPN1.;"
PLM3_60_b1_sep16_scaffold_449_3
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(3052..3741)
DNA (690bp) protein (230aa)
Aspartate racemase Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEI5_KOSOT
aspartate racemase
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_b1_sep16_scaffold_449_4
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3877..4404
DNA (528bp) protein (176aa)
Transcriptional regulator Tax=uncultured candidate division OP1 bacterium RepID=H5SQC7_9BACT
transcriptional regulator
Tax=BJP_IG2102_Gammaproteobacteria_62_140
PLM3_60_b1_sep16_scaffold_449_5
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4418..4840
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Ruminococcus sp. CAG:488 RepID=R5XXX1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA19440.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
PLM3_60_b1_sep16_scaffold_449_6
Leptospira sp. B5-022, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4837..6210
DNA (1374bp) protein (458aa)
Putative membrane protein Tax=Leptospira sp. B5-022 RepID=M6DAY7_9LEPT
Putative membrane protein {ECO:0000313|EMBL:EMK01348.1}; species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira sp. B5-022.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_449_7
unknown

Not on your lists

comp(6302..6589)
DNA (288bp) protein (96aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_449_8
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

Not on your lists

comp(6693..7673)
DNA (981bp) protein (327aa)
Electron transfer flavoprotein, alpha subunit Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LD69_CHLTF
Electron transfer flavoprotein subunit alpha {ECO:0000313|EMBL:KDA54714.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
electron transfer flavoprotein subunit alpha
PLM3_60_b1_sep16_scaffold_449_9
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(7684..8472)
DNA (789bp) protein (263aa)
Putative electron transfer flavoprotein subunit beta Tax=delta proteobacterium NaphS2 RepID=D8EXB4_9DELT
electron transfer flavoprotein subunit beta
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_449_10
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(8502..9743)
DNA (1242bp) protein (414aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029W5_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_449_11
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(9928..11169)
DNA (1242bp) protein (414aa)
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 2 bin=GWF2_Nitrospirae_44_13 species=uncultured Nitrospirae bacterium MY3-5B genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_449_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(11179..11409)
DNA (231bp) protein (77aa)
Acyl carrier protein Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B7Y8_TURPD
Acyl carrier protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_b1_sep16_scaffold_449_13
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11460..12200)
DNA (741bp) protein (247aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:EZP78006.1}; EC=1.1.1.100 {ECO:0000313|EMBL:EZP78006.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus stearothermophilus NUB3621.;"
3-ketoacyl-ACP reductase Tax=Geobacillus caldoxylosilyticus RepID=UPI000312BA24
fabG; 3-ketoacyl-ACP reductase
PLM3_60_b1_sep16_scaffold_449_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(12197..13129)
DNA (933bp) protein (311aa)
Malonyl CoA-acyl carrier protein transacylase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M0W0_GEODF
malonyl CoA-acyl carrier protein transacylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_b1_sep16_scaffold_449_15
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(13134..14135)
DNA (1002bp) protein (334aa)
Phosphate acyltransferase bin=GWC2_Nitrospirae_57_13 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
phosphate acyltransferase
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_449_16
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists


comp(14141..14326)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000380FA7D
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000255|HAMAP-Rule:MF_00340}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_449_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(14390..14926)
DNA (537bp) protein (179aa)
hypothetical protein; K07040 uncharacterized protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_449_18
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

15234..15758
DNA (525bp) protein (175aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Fragment) Tax=Clostridium botulinum C str. Eklund RepID=B1BDQ6_CLOBO
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_b1_sep16_scaffold_449_19
unknown

Not on your lists

15718..16218
DNA (501bp) protein (167aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_449_20
Geoalkalibacter subterraneus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16372..16905
DNA (534bp) protein (178aa)
hypothetical protein Tax=Calothrix sp. PCC 7103 RepID=UPI00030324F5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF06022.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibacter subterraneus.;"
PLM3_60_b1_sep16_scaffold_449_21
unknown

Not on your lists

comp(16892..17665)
DNA (774bp) protein (258aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_449_22
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17731..18189)
DNA (459bp) protein (153aa)
HNH endonuclease Tax=uncultured Acidobacteria bacterium RepID=H5SDB0_9BACT
Restriction endonuclease {ECO:0000313|EMBL:CDM66215.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
HNH endonuclease domain-containing protein
PLM3_60_b1_sep16_scaffold_449_23
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18308..19042)
DNA (735bp) protein (245aa)
DNA-3-methyladenine glycosylase III (EC:3.2.2.-)
Endonuclease III {ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|PIRNR:PIRNR001435};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
DNA-3-methyladenine glycosylase III Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SK4_SOLUE
PLM3_60_b1_sep16_scaffold_449_24
RBG_16_Euryarchaeota_62_10_curated, Euryarchaeota, Archaea

Not on your lists

comp(19137..19616)
DNA (480bp) protein (160aa)
hypothetical protein Tax=Bacillus fordii RepID=UPI0003766F3D
ectoine utilization protein EutC
Tax=RBG_16_Euryarchaeota_62_10_curated
Displaying 24 items

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