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PLM3_60_b1_sep16_scaffold_512

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_512_1

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3..1271
DNA (1269bp) protein (423aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B3DF46
Uncharacterized protein {ECO:0000313|EMBL:KKN42162.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_512_2

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1275..2222
DNA (948bp) protein (316aa)
serine/threonine protein kinase with TPR repeats bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Uncharacterized protein {ECO:0000313|EMBL:KKN11000.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_512_3

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2486..4855
DNA (2370bp) protein (790aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN59575.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
sulfatase bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
sulfatase
PLM3_60_b1_sep16_scaffold_512_4
unknown

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comp(4864..5295)
DNA (432bp) protein (144aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_512_5
unknown

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comp(5361..5765)
DNA (405bp) protein (135aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_512_6
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

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5884..6999
DNA (1116bp) protein (372aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase Tax=Candidatus Nitrospira defluvii RepID=D8PCL2_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_512_7
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

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7062..7928
DNA (867bp) protein (289aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L2I1_THERP
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
PLM3_60_b1_sep16_scaffold_512_8
R_Acidobacteria_59_13, Acidobacteria, Bacteria

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7925..9304
DNA (1380bp) protein (460aa)
hemG; protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] bin=GWC2_NOV_55_46 species=Nitrospina sp. AB-629-B18 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_NOV_55_46 organism_group=Proteobacteria
hemG2; protoporphyrinogen oxidase (EC:1.3.3.4)
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
PLM3_60_b1_sep16_scaffold_512_9
unknown

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comp(9283..9411)
DNA (129bp) protein (43aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_512_10
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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9493..11343
DNA (1851bp) protein (617aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4XWF0_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP36834.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_b1_sep16_scaffold_512_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(11515..12369)
DNA (855bp) protein (285aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q028W9_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ82433.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_512_12
unknown

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12485..13096
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_512_13
unknown

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13093..14058
DNA (966bp) protein (322aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_512_14
Wenxinia marina, Wenxinia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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14055..14471
DNA (417bp) protein (139aa)
Wenxma_4, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ70547.1}; EC=3.6.1.- {ECO:0000313|EMBL:KIQ70547.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Wenxinia.;" source="Wenxinia marina DSM 24838.;"
hypothetical protein Tax=Wenxinia marina RepID=UPI0003610DC4
DNA hydrolase
PLM3_60_b1_sep16_scaffold_512_15
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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14742..15149
DNA (408bp) protein (136aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socranskii subsp. paredis ATCC 35535.;"
dUTP diphosphatase (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase Tax=Treponema socranskii subsp. paredis ATCC 35535 RepID=S3JQF4_TRESO
Displaying 15 items

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