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PLM3_60_b1_sep16_scaffold_515

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_515_1
R_Elusimicrobia_39_32, Elusimicrobia, Bacteria

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2..397
DNA (396bp) protein (132aa)
mrp; protein mrp bin=bin9_gal15 species=Nitrolancetus hollandicus genus=Nitrolancetus taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
mrp; protein mrp
Tax=RIFCSPLOWO2_02_FULL_Elusimicrobia_39_32_curated
PLM3_60_b1_sep16_scaffold_515_2
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

Not on your lists

400..711
DNA (312bp) protein (104aa)
Uncharacterized protein bin=GWA2_Elusimicrobia_66_18 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWA2_Elusimicrobia_66_18 organism_group=Elusimicrobia organism_desc=Part of new group in this phylum
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
PLM3_60_b1_sep16_scaffold_515_3
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

816..3368
DNA (2553bp) protein (851aa)
Phosphorylase Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q798_9BACT
glycogen/starch/alpha-glucan phosphorylase
Tax=RBG_16_Spirochaetes_49_21_curated
PLM3_60_b1_sep16_scaffold_515_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3578..4693
DNA (1116bp) protein (372aa)
Putative Zn-dependent peptidase Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLH7_SINAD
Zn-dependent peptidase
Putative Zn-dependent peptidase {ECO:0000313|EMBL:AGA29698.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_60_b1_sep16_scaffold_515_5
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

4730..6232
DNA (1503bp) protein (501aa)
Predicted Zn-dependent peptidase {ECO:0000313|EMBL:CDM66929.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
Peptidase M16 domain protein bin=GWB2_Ignavibacteria_35_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
peptidase M16 domain-containing protein
PLM3_60_b1_sep16_scaffold_515_6
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6307..7035)
DNA (729bp) protein (243aa)
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B2E7EE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ97022.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
PLM3_60_b1_sep16_scaffold_515_7
RBG_16_Chloroflexi_58_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7319..8839)
DNA (1521bp) protein (507aa)
Peptidase S10 serine carboxypeptidase Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BAK1_MEISD
peptidase S10 serine carboxypeptidase
Tax=RBG_16_Chloroflexi_58_14_curated
PLM3_60_b1_sep16_scaffold_515_8
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

9041..9811
DNA (771bp) protein (257aa)
Cobalamin (Vitamin B12) biosynthesis CbiM protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU3_THET1
cobalamin (vitamin B12) biosynthesis protein CbiM
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_60_b1_sep16_scaffold_515_9
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

9860..10846
DNA (987bp) protein (329aa)
Cobalt ABC transporter, inner membrane subunit CbiQ Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFU4_THET1
cobalt ABC transporter permease
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_60_b1_sep16_scaffold_515_10
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

Not on your lists

10843..11664
DNA (822bp) protein (274aa)
hypothetical protein Tax=Uliginosibacterium gangwonense RepID=UPI000372469B
putative cobalt ABC transporter ATP binding protein
Tax=RBG_16_KB1_OP1_55_9_curated
PLM3_60_b1_sep16_scaffold_515_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11908..13389)
DNA (1482bp) protein (494aa)
Radical SAM domain protein Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F852_ACIC5
Fe-S oxidoreductase {ECO:0000313|EMBL:CDM65990.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
radical SAM domain-containing protein
PLM3_60_b1_sep16_scaffold_515_12
unknown

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comp(13485..13763)
DNA (279bp) protein (93aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_515_13
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(13813..14760)
DNA (948bp) protein (316aa)
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase Tax=Thermotoga sp. EMP RepID=J9DQD0_9THEM
Tax=RBG_16_Chloroflexi_56_8_curated
PLM3_60_b1_sep16_scaffold_515_14
unknown

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comp(14744..14866)
DNA (123bp) protein (41aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_515_15
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

14892..16634
DNA (1743bp) protein (581aa)
Peptidase M14 carboxypeptidase A Tax=Gloeobacter kilaueensis JS1 RepID=U5QKU3_9CYAN
Predicted carboxypeptidase {ECO:0000313|EMBL:CDM64981.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M14 carboxypeptidase A
PLM3_60_b1_sep16_scaffold_515_16
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

16631..18154
DNA (1524bp) protein (508aa)
Glycosyl transferase family 2 Tax=uncultured bacterium RepID=K2DBJ5_9BACT
family 2 glycosyl transferase
Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
PLM3_60_b1_sep16_scaffold_515_17
Fischerella sp. JSC-11, Fischerella, Stigonematales, Cyanobacteria, Bacteria

Not on your lists

18447..19484
DNA (1038bp) protein (346aa)
peptidase S8 Tax=Microchaete sp. PCC 7126 RepID=UPI00034A2B48
Peptidase S8 and S53 subtilisin kexin sedolisin {ECO:0000313|EMBL:EHC17931.1}; species="Bacteria; Cyanobacteria; Stigonematales; Fischerella.;" source="Fischerella sp. JSC-11.;"
peptidase S8 and S53 subtilisin kexin sedolisin
PLM3_60_b1_sep16_scaffold_515_18
unknown

Not on your lists

comp(19503..19766)
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_515_19
unknown

Not on your lists

comp(19833..19988)
DNA (156bp) protein (52aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_515_20
Candidatus Cloacimonas acidaminovorans, Candidatus Cloacimonas, Cloacimonetes, Bacteria

Not on your lists

comp(20212..24936)
DNA (4725bp) protein (1575aa)
hypothetical protein Tax=Cloacimonetes bacterium JGI 0000039-A21 RepID=UPI0003751FF3
Uncharacterized protein {ECO:0000313|EMBL:CAO81393.1}; species="Bacteria; Cloacimonetes; Candidatus Cloacimonas.;" source="Cloacamonas acidaminovorans (strain Evry).;"
Fis family NifA subfamily transcriptional regulator
PLM3_60_b1_sep16_scaffold_515_21
unknown

Not on your lists

25000..25734
DNA (735bp) protein (245aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_515_22
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25781..27067
DNA (1287bp) protein (429aa)
GTPase HflX Tax=Desulfotomaculum ruminis (strain ATCC 23193 / DSM 2154 / NCIB 8452 / DL) RepID=F6DS13_DESRL
GTP-binding proten HflX
Tax=BJP_08E140C01_Clostridiales_46_19
PLM3_60_b1_sep16_scaffold_515_23

Not on your lists

27012..28382
DNA (1371bp) protein (457aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN64584.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
O-linked N-acetylglucosamine transferase, SPINDLY family
PLM3_60_b1_sep16_scaffold_515_24
RBG_16_Deltaproteobacteria_58_17_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28386..29333
DNA (948bp) protein (316aa)
hypothetical protein
Hypothetical exported protein bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=RBG_16_Deltaproteobacteria_58_17_curated
PLM3_60_b1_sep16_scaffold_515_25
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

29309..31135
DNA (1827bp) protein (609aa)
glo:Glov_1969 adenylate/guanylate cyclase with CHASE sensor; K01768 adenylate cyclase [EC:4.6.1.1] bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
putative transmembrane sensor domain protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Displaying 25 items

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