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PLM3_60_b1_sep16_scaffold_544

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_544_1
unknown

Not on your lists

comp(2..88)
DNA (87bp) protein (29aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_544_2
RBG_16_Chloroflexi_54_18_curated, Chloroflexi, Bacteria

Not on your lists

comp(92..835)
DNA (744bp) protein (248aa)
ABC-type polysaccharide/polyol phosphate export system, permease component Tax=Caulobacter sp. AP07 RepID=J3AKW1_9CAUL
ABC-2 type transporter
Tax=RBG_16_Chloroflexi_54_18_curated
PLM3_60_b1_sep16_scaffold_544_3
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(944..2059)
DNA (1116bp) protein (372aa)
hypothetical protein Tax=Desulfovibrio oxyclinae RepID=UPI000372EA41
group 1 glycosyl transferase
Glycosyl transferase group 1 {ECO:0000313|EMBL:AFZ53317.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
PLM3_60_b1_sep16_scaffold_544_4
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2091..3032)
DNA (942bp) protein (314aa)
Putative uncharacterized protein Tax=uncultured Desulfobacterium sp. RepID=E1YIE9_9DELT
Putative uncharacterized protein {ECO:0000313|EMBL:CBX29996.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
family 2 glycosyl transferase
PLM3_60_b1_sep16_scaffold_544_5
GWB2_Elusimicrobia_63_22_curated, Elusimicrobia, Bacteria

Not on your lists

comp(3190..5103)
DNA (1914bp) protein (638aa)
asnB; asparagine synthetase (glutamine-hydrolyzing) protein (EC:6.3.5.4)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI0003747100
Tax=GWB2_Elusimicrobia_63_22_curated
PLM3_60_b1_sep16_scaffold_544_6
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(5169..7445)
DNA (2277bp) protein (759aa)
Replication restart DNA helicase PriA Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B75_SOLUE
replication restart DNA helicase PriA
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_544_7
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7546..8112)
DNA (567bp) protein (189aa)
hypothetical protein Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00035CACB2
phage SPO1 DNA polymerase-like protein
Tax=RBG_16_Deltaproteobacteria_50_11_curated
PLM3_60_b1_sep16_scaffold_544_8
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

Not on your lists

comp(8201..9409)
DNA (1209bp) protein (403aa)
Phosphopantothenoylcysteine synthetase/decarboxylase Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D1C2_PELTS
Dfp; phosphopantothenoylcysteine synthetase/decarboxylase
Tax=RBG_13_Aminicenantes_63_10_curated
PLM3_60_b1_sep16_scaffold_544_9
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(9411..9641)
DNA (231bp) protein (77aa)
RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega Tax=Cystobacter fuscus DSM 2262 RepID=S9P884_9DELT
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_544_10
Neisseria meningitidis, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9741..10358)
DNA (618bp) protein (206aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria meningitidis 73696.;"
gmk; guanylate kinase (EC:2.7.4.8)
Guanylate kinase Tax=Neisseria meningitidis NM255 RepID=J8W9U4_NEIME
PLM3_60_b1_sep16_scaffold_544_11
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10342..10638)
DNA (297bp) protein (99aa)
hypothetical protein Tax=Bacillus coahuilensis RepID=UPI0001850C7D
UPF0296 protein DP68_06195 {ECO:0000256|HAMAP-Rule:MF_01503}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_544_12
Caldicellulosiruptor hydrothermalis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10931..11800)
DNA (870bp) protein (290aa)
Uncharacterized protein Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4QCK1_CALH1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ07418.1}; species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosiruptor.;" source="Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 /; 108).;"
PLM3_60_b1_sep16_scaffold_544_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(11820..13550)
DNA (1731bp) protein (577aa)
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] bin=CNBR_ACIDO species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
phospholipid-lipopolysaccharide ABC transporter
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_544_14
unknown

Not on your lists

13734..14006
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_544_15
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

comp(13884..15836)
DNA (1953bp) protein (651aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
cellulose synthase subunit BcsC
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM3_60_b1_sep16_scaffold_544_16
unknown

Not on your lists

15924..16205
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_544_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

16202..17032
DNA (831bp) protein (277aa)
DNA protecting protein DprA {ECO:0000313|EMBL:CDM66966.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
dprA; DNA protection single-strand-binding protein DprA
PLM3_60_b1_sep16_scaffold_544_18
RBG_16_RIF03_38_10_curated, RIF03, Bacteria

Not on your lists

17128..19527
DNA (2400bp) protein (800aa)
topA; DNA topoisomerase I (EC:5.99.1.2) bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
DNA topoisomerase
Tax=RBG_16_RIF03_38_10_curated
PLM3_60_b1_sep16_scaffold_544_19
CG_Delta_01, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19622..20269
DNA (648bp) protein (216aa)
trmFO; methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO (EC:2.1.1.74)
tRNA (uracil-5-)-methyltransferase Tax=Brevibacillus sp. phR RepID=UPI0002EAC32C
Tax=CG_Delta_01
Displaying 19 items

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