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PLM3_60_b1_sep16_scaffold_612

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_612_1
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(75..1643)
DNA (1569bp) protein (523aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Carboxyl transferase Tax=Nitrococcus mobilis Nb-231 RepID=A4BVP9_9GAMM
Carboxyl transferase {ECO:0000313|EMBL:EAR20202.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
PLM3_60_b1_sep16_scaffold_612_2
RBG_16_Betaproteobacteria_64_18_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1816..3231
DNA (1416bp) protein (472aa)
multi-sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein Tax=Thiomicrospira arctica RepID=UPI00037A29D4
Tax=RBG_16_Betaproteobacteria_64_18_curated
PLM3_60_b1_sep16_scaffold_612_3
unknown

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comp(3277..3552)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_612_4
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

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4175..4450
DNA (276bp) protein (92aa)
TonB-dependent receptor bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
PLM3_60_b1_sep16_scaffold_612_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

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comp(4494..5885)
DNA (1392bp) protein (464aa)
hypothetical protein Tax=Nitrospina sp. AB-629-B06 RepID=UPI00036F0EAE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
PLM3_60_b1_sep16_scaffold_612_6
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5885..6244)
DNA (360bp) protein (120aa)
Tetratricopeptide TPR_2 repeat protein Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G827_GEOUR
TPR repeat-containing protein
Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
PLM3_60_b1_sep16_scaffold_612_7
GWB2_Ignavibacteria_35_6b_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(6362..7546)
DNA (1185bp) protein (395aa)
Response regulator receiver modulated serine phosphatase bin=GWF2_Lentisphaerae_57_35 species=Desulfovibrio salexigens genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
response regulator receiver modulated serine phosphatase
Tax=GWB2_Ignavibacteria_35_6b_curated
PLM3_60_b1_sep16_scaffold_612_8
Cyanothece sp. PCC 8801, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(7623..8636)
DNA (1014bp) protein (338aa)
chemotaxis-specific methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 8801) (Synechococcus sp. (strain PCC 8801 /; RF-1)).;"
Chemotaxis response regulator protein-glutamate methylesterase Tax=Cyanothece sp. (strain PCC 8801) RepID=B7K305_CYAP8
PLM3_60_b1_sep16_scaffold_612_9
Crinalium epipsammum, Crinalium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(8685..10985)
DNA (2301bp) protein (767aa)
CheA signal transduction histidine kinase Tax=Crinalium epipsammum PCC 9333 RepID=K9W3F9_9CYAN
CheA signal transduction histidine kinase
CheA signal transduction histidine kinase {ECO:0000313|EMBL:AFZ14287.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Crinalium.;" source="Crinalium epipsammum PCC 9333.;"
PLM3_60_b1_sep16_scaffold_612_10
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10933..11589)
DNA (657bp) protein (219aa)
hypothetical protein Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034DA053
CheW-like domain protein {ECO:0000313|EMBL:KFC63832.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
chew domain protein
PLM3_60_b1_sep16_scaffold_612_11
Moorea producens, Moorea, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(11586..12464)
DNA (879bp) protein (293aa)
Methylase of chemotaxis methyl-accepting protein Tax=Moorea producens 3L RepID=F4XW90_9CYAN
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:EGJ31075.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Moorea.;" source="Moorea producens 3L.;"
methylase of chemotaxis methyl-accepting protein
PLM3_60_b1_sep16_scaffold_612_12
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(12530..14605)
DNA (2076bp) protein (692aa)
Methyl-accepting chemotaxis protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DHY3_SINAD
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AGA28994.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_60_b1_sep16_scaffold_612_13
Calothrix sp. PCC 7507, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(14608..15849)
DNA (1242bp) protein (414aa)
Urea-binding protein Tax=Calothrix sp. PCC 7507 RepID=K9PNQ5_9CYAN
urea-binding protein
Urea-binding protein {ECO:0000313|EMBL:AFY34591.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 7507.;"
PLM3_60_b1_sep16_scaffold_612_14
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(15849..17480)
DNA (1632bp) protein (544aa)
Methyl-accepting chemotaxis protein Tax=Oscillatoria acuminata PCC 6304 RepID=K9TF62_9CYAN
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AFY81053.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" source="Oscillatoria acuminata PCC 6304.;"
PLM3_60_b1_sep16_scaffold_612_15
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17548..17958
DNA (411bp) protein (137aa)
Putative anti-sigma regulatory factor, serine/threonine protein kinase Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AW12_SYNWW
anti-sigma regulatory factor, serine/threonine protein kinase
Putative anti-sigma regulatory factor, serine/threonine protein kinase {ECO:0000313|EMBL:ABI69092.1}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen).;"
PLM3_60_b1_sep16_scaffold_612_16
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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17955..19001
DNA (1047bp) protein (349aa)
Putative uncharacterized protein bin=GWF2_Lentisphaerae_57_35 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
ABC transporter substrate-binding protein
Tax=GWF2_Lentisphaerae_57_35_curated
PLM3_60_b1_sep16_scaffold_612_17
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19200..20057)
DNA (858bp) protein (286aa)
Membrane bound O-acyl transferase MBOAT family protein bin=GWC2_Deltaproteobacteria_55_46 species=Marinomonas mediterranea genus=Marinomonas taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Putative poly(beta-D-mannuronate) O-acetylase
Tax=GWC2_Deltaproteobacteria_55_46b_curated
Displaying 17 items

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