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PLM3_60_b1_sep16_scaffold_4435

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_4435_1
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(67..1245)
DNA (1179bp) protein (393aa)
outer membrane protein/protective antigen OMA87 bin=CNBR_ACIDO species=Echinicola pacifica genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
surface antigen (D15)
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3_60_b1_sep16_scaffold_4435_2
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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comp(1369..3195)
DNA (1827bp) protein (609aa)
Uncharacterized protein Tax=Pedosphaera parvula Ellin514 RepID=B9XG38_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF61200.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_4435_3
Cyanothece sp. PCC 7822, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(3252..3992)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UBH9_CYAP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADN12811.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7822).;"
PLM3_60_b1_sep16_scaffold_4435_4
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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4090..5640
DNA (1551bp) protein (517aa)
hypothetical protein Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003720DDD
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
PLM3_60_b1_sep16_scaffold_4435_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5710..7026)
DNA (1317bp) protein (439aa)
Transporter {ECO:0000313|EMBL:AKF09602.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
Plastidic atp adp transporter (Fragment) bin=GWE2_TM6_42_60 species=GWE2_TM6_42_60 genus=GWE2_TM6_42_60 taxon_order=GWE2_TM6_42_60 taxon_class=GWE2_TM6_42_60 phylum=TM6 tax=GWE2_TM6_42_60 organism_group=TM6
hypothetical protein
PLM3_60_b1_sep16_scaffold_4435_6
RBG_16_RIF_WS3X_71_46_curated, RIF-WS3X, Bacteria

Not on your lists

7224..8489
DNA (1266bp) protein (422aa)
Major facilitator superfamily MFS_1 Tax=Chloroflexus RepID=A9WAF7_CHLAA bin=16ft_combo_ws3_JS1 species=unknown genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
major facilitator superfamily protein
Tax=RBG_16_RIF_WS3X_71_46_curated
PLM3_60_b1_sep16_scaffold_4435_7
RIFOXYD1_FULL_Bdellovibrionales_55_31_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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8703..9386
DNA (684bp) protein (228aa)
5`-nucleotidase family protein bin=GWA1_Deltaproteobacteria_52_35 species=Myxococcus xanthus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
5`-nucleotidase
Tax=RIFOXYD1_FULL_Bdellovibrionales_55_31_curated
PLM3_60_b1_sep16_scaffold_4435_8
Bacillus indicus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9347..9994
DNA (648bp) protein (216aa)
2', 3'-cyclic nucleotide 2'-phosphodiesterase {ECO:0000313|EMBL:KEZ48052.1}; EC=3.1.3.6 {ECO:0000313|EMBL:KEZ48052.1};; EC=3.1.4.16 {ECO:0000313|EMBL:KEZ48052.1};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus indicus LMG 22858.;"
5'-nucleotidase (EC:3.1.3.5)
Bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase protein Tax=Bacillus sonorensis L12 RepID=M5PBF0_9BACI
Displaying 8 items

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