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PLM3_60_b1_sep16_scaffold_4459

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_4459_1
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

123..740
DNA (618bp) protein (206aa)
hypothetical protein bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
PLM3_60_b1_sep16_scaffold_4459_2
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(786..1112)
DNA (327bp) protein (109aa)
mRNA interferase Tax=uncultured bacterium RepID=B0BH37_9BACT
growth inhibitor
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3_60_b1_sep16_scaffold_4459_3
RBG_16_Chloroflexi_48_8_curated, Chloroflexi, Bacteria

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comp(1099..1329)
DNA (231bp) protein (77aa)
addiction module antitoxin Tax=Methylohalobius crimeensis RepID=UPI0003B634BF
hypothetical protein
Tax=RBG_16_Chloroflexi_48_8_curated
PLM3_60_b1_sep16_scaffold_4459_4
unknown

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comp(1298..1915)
DNA (618bp) protein (206aa)
NERD domain-containing protein, partial Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288DB9B
PLM3_60_b1_sep16_scaffold_4459_5
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2001..3260)
DNA (1260bp) protein (420aa)
NADH dehydrogenase, FAD-containing subunit Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DG27_SINAD
NADH dehydrogenase, FAD-containing subunit
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:AGP32376.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_b1_sep16_scaffold_4459_6
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3284..3646)
DNA (363bp) protein (121aa)
id=2136657 bin=GWD2_Deltaproteobacteria_55_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
PLM3_60_b1_sep16_scaffold_4459_7
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

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comp(3633..3875)
DNA (243bp) protein (81aa)
Uncharacterized protein bin=GWC2_Methylomirabilis_70_16 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prevent-host-death family protein
Tax=GWC2_Rokubacteria_70_16_curated
PLM3_60_b1_sep16_scaffold_4459_8
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4032..4382)
DNA (351bp) protein (117aa)
Uncharacterized protein Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T0X1_META2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23405.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
PLM3_60_b1_sep16_scaffold_4459_9
unknown

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4964..5299
DNA (336bp) protein (112aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4459_10
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6520..6648)
DNA (129bp) protein (43aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090, ECO:0000313|EMBL:CCE23404.1};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
protein-L-isoaspartate O-methyltransferase Tax=Methylomicrobium buryatense RepID=UPI000346BDB0
pcm; protein-L-isoaspartate O-methyltransferase 2
PLM3_60_b1_sep16_scaffold_4459_11
unknown

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comp(6859..7485)
DNA (627bp) protein (209aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4459_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7524..8267)
DNA (744bp) protein (248aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090, ECO:0000313|EMBL:CCE23404.1};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
Protein-L-isoaspartate O-methyltransferase Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4T0X0_META2
pcm; protein-L-isoaspartate O-methyltransferase 2
PLM3_60_b1_sep16_scaffold_4459_13
unknown

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8421..9086
DNA (666bp) protein (222aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_4459_14
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

9108..10055
DNA (948bp) protein (316aa)
hypothetical protein Tax=Thermodesulfatator atlanticus RepID=UPI0003B597C2
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AEH45860.1}; Flags: Precursor;; species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812).;"
PLM3_60_b1_sep16_scaffold_4459_15
unknown

Not on your lists

10079..11119
DNA (1041bp) protein (347aa)
hypothetical protein, partial Tax=Sphingomonas wittichii RepID=UPI00037D4DB7
TonB-dependent receptor
PLM3_60_b1_sep16_scaffold_4459_16
unknown

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comp(11201..11428)
DNA (228bp) protein (76aa)

This feature has no annotations

Displaying 16 items

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