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PLM3_60_b1_sep16_scaffold_2260

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2260_1
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..1829)
DNA (1827bp) protein (609aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6EZY7_9PROT
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CDK98800.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
PLM3_60_b1_sep16_scaffold_2260_2
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1801..2382)
DNA (582bp) protein (194aa)
Transcriptional regulator, TetR family Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTV0_DESBD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ACU89573.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;" source="Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378); (Desulfovibrio baculatus).;"
PLM3_60_b1_sep16_scaffold_2260_3
unknown

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comp(2527..2928)
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2260_4
GWC2_Deltaproteobacteria_65_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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3035..3799
DNA (765bp) protein (255aa)
Alpha/beta family hydrolase bin=GWC2_Proteo_65_14_Ab886 species=Deinococcus deserti genus=Deinococcus taxon_order=Deinococcales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
hydrolase or acyltransferase
Tax=GWC2_Deltaproteobacteria_65_14_curated
PLM3_60_b1_sep16_scaffold_2260_5
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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3993..4772
DNA (780bp) protein (260aa)
Small-conductance mechanosensitive ion channel Tax=Bacteria RepID=D7AMD7_GEOSK
mscS-2; small-conductance mechanosensitive ion channel
Small-conductance mechanosensitive ion channel {ECO:0000313|EMBL:AAR35692.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM3_60_b1_sep16_scaffold_2260_6
Candidatus Kuenenia stuttgartiensis, Candidatus Kuenenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

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comp(4905..5465)
DNA (561bp) protein (187aa)
Strongly sinmilar to dTDP-4-deoxyrhamnose 3,5 epimerase {ECO:0000313|EMBL:CAJ72379.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CAJ72379.1};; species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales; Candidatus Brocadiaceae; Candidatus Kuenenia.;" source="Candidatus Kuenenia stuttgartiensis.;"
dTDP-4-dehydrorhamnose 3,5-epimerase Tax=Acaryochloris sp. CCMEE 5410 RepID=UPI000248500D
rfbC; dTDP-4-dehydrorhamnose 3,5-epimerase
PLM3_60_b1_sep16_scaffold_2260_7
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5465..8629)
DNA (3165bp) protein (1055aa)
Heavy metal efflux pump, CzcA family protein; K15726 cobalt-zinc-cadmium resistance protein CzcA bin=CNBR_ACIDO species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Heavy metal efflux pump, CzcA family protein {ECO:0000313|EMBL:AEI67186.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus fulvus (strain ATCC BAA-855 / HW-1).;"
Heavy metal efflux pump, CzcA family protein
PLM3_60_b1_sep16_scaffold_2260_8
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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comp(8642..9844)
DNA (1203bp) protein (401aa)
Heavy metal efflux pump, CzcB family bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RND family efflux transporter MFP subunit
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_b1_sep16_scaffold_2260_9
R_Acidobacteria_61_28, Acidobacteria, Bacteria

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comp(9841..11166)
DNA (1326bp) protein (442aa)
outer membrane protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
outer membrane protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_60_b1_sep16_scaffold_2260_10
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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11667..11942
DNA (276bp) protein (92aa)
Prevent-host-death family protein Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SJZ5_9DELT
Prevent-host-death family protein {ECO:0000313|EMBL:EFI36198.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfonatronospira.;" source="Desulfonatronospira thiodismutans ASO3-1.;"
prevent-host-death family protein
Displaying 10 items

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