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PLM3_60_b1_sep16_scaffold_2504

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2504_1
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

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comp(3..1376)
DNA (1374bp) protein (458aa)
Putative uncharacterized protein bin=GWF2_Melioribacter_38_21 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_60_b1_sep16_scaffold_2504_2
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(1429..2262)
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase C Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ISG0_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:EZH73027.1}; species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;"
rsmC; ribosomal RNA small subunit methyltransferase C
PLM3_60_b1_sep16_scaffold_2504_3
Paenibacillus sabinae, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2259..3452)
DNA (1194bp) protein (398aa)
Transcriptional regulator, ArsR family Tax=Moorella thermoacetica (strain ATCC 39073) RepID=Q2RGR2_MOOTA
ArsR family transcriptional regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:AHV97764.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sabinae T27.;"
PLM3_60_b1_sep16_scaffold_2504_4
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(3717..4025)
DNA (309bp) protein (103aa)
Uncharacterized protein Tax=Spirochaeta africana (strain ATCC 700263 / DSM 8902 / Z-7692) RepID=H9UGA3_SPIAZ
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_2504_5
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

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4256..4447
DNA (192bp) protein (64aa)
cytoplasmic protein bin=bin7_NC10_sister species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cytoplasmic protein
Tax=RBG_16_Zixibacteria_50_21_curated
PLM3_60_b1_sep16_scaffold_2504_6
unknown

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4624..5400
DNA (777bp) protein (259aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2504_7
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5397..5882)
DNA (486bp) protein (162aa)
Transcriptional regulator, AraC family protein Tax=Cystobacter fuscus DSM 2262 RepID=S9Q5A2_9DELT
Transcriptional regulator, AraC family protein {ECO:0000313|EMBL:EPX56509.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
ykgD; AraC family transcriptional regulator
PLM3_60_b1_sep16_scaffold_2504_8
Pseudomonas sp. CFII64, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5981..6529
DNA (549bp) protein (183aa)
Hydrolase Tax=Pseudomonas sp. CFII64 RepID=S6GXV4_9PSED
Hydrolase {ECO:0000313|EMBL:EPJ80110.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CFII64.;"
isochorismatase hydrolase
PLM3_60_b1_sep16_scaffold_2504_9
Pandoraea apista, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6526..8283
DNA (1758bp) protein (586aa)
hypothetical protein Tax=Pandoraea sp. B-6 RepID=UPI0003491F5F
AraC family transcriptional regulator
AraC family transcriptional regulator {ECO:0000313|EMBL:AJF00217.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea apista.;"
PLM3_60_b1_sep16_scaffold_2504_10
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8303..8551)
DNA (249bp) protein (83aa)
gloA; putative lactoylglutathione lyase (EC:4.4.1.5)
Putative lactoylglutathione lyase {ECO:0000313|EMBL:CAJ36148.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CAJ36148.1};; species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
Putative lactoylglutathione lyase Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W645_UNCMA
PLM3_60_b1_sep16_scaffold_2504_11
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(8548..9264)
DNA (717bp) protein (239aa)
Peptidase M28 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHT1_RHOMR
peptidase M28
Peptidase M28 {ECO:0000313|EMBL:AEN73397.1}; Flags: Precursor;; species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus SG0.5JP17-172.;"
PLM3_60_b1_sep16_scaffold_2504_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(9290..9814)
DNA (525bp) protein (175aa)
Peptidase M28 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LM08_HALO1
peptidase M28
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_2504_13
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(9811..10338)
DNA (528bp) protein (176aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TW31_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH84414.1}; Flags: Precursor;; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
putative permease, DMT superfamily
Displaying 13 items

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