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PLM3_60_b1_sep16_scaffold_2635

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2635_1
Listeria fleischmannii, Listeria, Bacillales, Bacilli, Firmicutes, Bacteria

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1..210
DNA (210bp) protein (70aa)
Nitrite extrusion protein Tax=Listeria fleischmannii subsp. coloradonensis RepID=H7F3B4_9LIST
Nitrite extrusion protein {ECO:0000313|EMBL:EIA21077.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Listeriaceae; Listeria.;" source="Listeria fleischmannii subsp. coloradonensis.;"
major facilitator superfamily protein
PLM3_60_b1_sep16_scaffold_2635_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(200..1222)
DNA (1023bp) protein (341aa)
Alcohol dehydrogenase Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MXW7_CORCM
adh; alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AFE07979.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3_60_b1_sep16_scaffold_2635_3
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

1470..2768
DNA (1299bp) protein (433aa)
UspA domain protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
UspA domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_b1_sep16_scaffold_2635_4
R_Deltaproteobacteria_46_8, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2901..3398)
DNA (498bp) protein (166aa)
Putative uncharacterized protein bin=GWC2_OP3-like_45_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_46_8_curated
PLM3_60_b1_sep16_scaffold_2635_5
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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3704..4951
DNA (1248bp) protein (416aa)
Sodium/sulphate symporter bin=GWC2_Deltaproteobacteria_42_51 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_2635_6
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

5240..6025
DNA (786bp) protein (262aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG45_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3_60_b1_sep16_scaffold_2635_7
Burkholderia sp. CCGE1002, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6082..6543
DNA (462bp) protein (154aa)
Uncharacterized protein Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WHT0_BURSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG18025.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. (strain CCGE1002).;"
PLM3_60_b1_sep16_scaffold_2635_8
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

6567..7886
DNA (1320bp) protein (440aa)
Cystathionine gamma-lyase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ITX7_KORVE
cystathionine gamma-lyase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_b1_sep16_scaffold_2635_9
unknown

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comp(7849..8022)
DNA (174bp) protein (58aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2635_10
unknown

Not on your lists

comp(8071..8310)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2635_11
unknown

Not on your lists

comp(8454..8663)
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2635_12
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8773..9564
DNA (792bp) protein (264aa)
CoA-binding domain protein bin=GWA2_Elusimicrobia_69_24 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
putative acyl-CoA synthetase
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
Displaying 12 items

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