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PLM3_60_b1_sep16_scaffold_2707

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_2707_1
GWA2_Deltaproteobacteria_54_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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138..656
DNA (519bp) protein (173aa)
Transferase hexapeptide repeat containing protein Tax=Pelosinus fermentans JBW45 RepID=I9DMI8_9FIRM
transferase hexapeptide repeat containing protein
Tax=GWA2_Deltaproteobacteria_54_12_curated
PLM3_60_b1_sep16_scaffold_2707_2
Phascolarctobacterium sp. CAG:266, Phascolarctobacterium, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


653..1894
DNA (1242bp) protein (414aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Phascolarctobacterium.;" source="Phascolarctobacterium sp. CAG:266.;"
hisS; putative histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Phascolarctobacterium sp. CAG:266 RepID=R6HFD0_9FIRM
PLM3_60_b1_sep16_scaffold_2707_3
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1891..3636
DNA (1746bp) protein (582aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:CCO08795.1}; EC=6.1.1.12 {ECO:0000313|EMBL:CCO08795.1};; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam5 = DSM 18033.;"
Aspartate--tRNA ligase Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8E058_9FIRM
aspartyl-tRNA synthetase
PLM3_60_b1_sep16_scaffold_2707_4
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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3633..4604
DNA (972bp) protein (324aa)
ATPase associated with various cellular activities, AAA_3 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02B73_SOLUE
ATPase
ATPase associated with various cellular activities, AAA_3 {ECO:0000313|EMBL:ABJ81693.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_2707_5
unknown

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4704..5495
DNA (792bp) protein (264aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2707_6
RBG_19FT_COMBO_Zixibacteria_42_43_curated, Zixibacteria, Bacteria

Not on your lists

5816..7234
DNA (1419bp) protein (473aa)
hypothetical protein PspoU_19881 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
hypothetical protein
Tax=RBG_19FT_COMBO_Zixibacteria_42_43_curated
PLM3_60_b1_sep16_scaffold_2707_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7242..9683)
DNA (2442bp) protein (814aa)
Non-specific serine/threonine protein kinase Tax=Desmospora sp. 8437 RepID=F5SJ69_9BACL
protein kinase
Protein kinase {ECO:0000313|EMBL:AHG90360.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_60_b1_sep16_scaffold_2707_8
GWB1_OD1_41_12, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(9941..12262)
DNA (2322bp) protein (774aa)
Glycosyl transferase family protein Tax=uncultured bacterium RepID=K2CMT1_9BACT
Glycosyl transferase family 39 {ECO:0000313|EMBL:KKR88422.1}; species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWB1_41_12.;"
4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
PLM3_60_b1_sep16_scaffold_2707_9
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12266..13552)
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus xanthus (strain DK 1622).;"
Sensor histidine kinase Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D1Y6_MYXXD
sensor histidine kinase
PLM3_60_b1_sep16_scaffold_2707_10
unknown

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comp(13712..14914)
DNA (1203bp) protein (401aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2707_11
Volvox carteri, Volvox, Chlamydomonadales, Chlorophyceae, Chlorophyta, Viridiplantae

Not on your lists

comp(14904..15791)
DNA (888bp) protein (296aa)
Putative uncharacterized protein Tax=Volvox carteri RepID=D8TTI6_VOLCA
Putative uncharacterized protein {ECO:0000313|EMBL:EFJ49313.1}; species="Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; Volvocaceae; Volvox.;" source="Volvox carteri (Green alga).;"
TonB, C-terminal
PLM3_60_b1_sep16_scaffold_2707_12
GWC2_Ignavibacteria_rel_36_12_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15884..17170
DNA (1287bp) protein (429aa)
thrC; threonine synthase (EC:4.2.3.1)
L-threonine synthase Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11YZ7_CYTH3
Tax=GWC2_Ignavibacteria_rel_36_12_curated
PLM3_60_b1_sep16_scaffold_2707_13
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17255..17854)
DNA (600bp) protein (200aa)
Uncharacterized protein Tax=Frankia alni (strain ACN14a) RepID=Q0RQK0_FRAAA
Esterase-like activity of phytase {ECO:0000313|EMBL:KJE23989.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_2707_14
Streptomyces venezuelae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17851..18687)
DNA (837bp) protein (279aa)
Uncharacterized protein Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R3E9_STRVP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA55791.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 /; JCM 4526 / NBRC 13096 / PD 04745).;"
PLM3_60_b1_sep16_scaffold_2707_15
unknown

Not on your lists

comp(18818..19450)
DNA (633bp) protein (211aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_2707_16
GWE2_Spirochaetes_31_10_curated, Spirochaetes, Bacteria

Not on your lists

19601..19969
DNA (369bp) protein (123aa)
id=2142841 bin=GWE2_Spirochaete_31_10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
Tax=GWE2_Spirochaetes_31_10_curated
PLM3_60_b1_sep16_scaffold_2707_17
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(19966..20874)
DNA (909bp) protein (303aa)
chl:Chy400_3886 UspA domain-containing protein bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_b1_sep16_scaffold_2707_18
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

20934..21383
DNA (450bp) protein (150aa)
Alpha amylase catalytic region Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LM79_HALO1
alpha amylase
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_b1_sep16_scaffold_2707_19
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21472..22503
DNA (1032bp) protein (344aa)
Alpha-amylase 3 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MY98_CORCM
amyC; alpha-amylase 3
Alpha-amylase 3 {ECO:0000313|EMBL:AFE08049.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3_60_b1_sep16_scaffold_2707_20
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22543..23322)
DNA (780bp) protein (260aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MUE9_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06288.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3_60_b1_sep16_scaffold_2707_21
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(23333..24463)
DNA (1131bp) protein (377aa)
Uncharacterized protein Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HJR5_CYAP4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL45018.1}; Flags: Precursor;; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / ATCC 29141).;"
PLM3_60_b1_sep16_scaffold_2707_22
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(24474..25424)
DNA (951bp) protein (317aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MY95_CORCM
hypothetical protein
Tax=RBG_13_Acidobacteria_68_16_curated
PLM3_60_b1_sep16_scaffold_2707_23
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25483..25851)
DNA (369bp) protein (123aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MY94_CORCM
Uncharacterized protein {ECO:0000313|EMBL:KFE68906.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
hypothetical protein
Displaying 23 items

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