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PLM3_60_b1_sep16_scaffold_1252

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1252_1
RLO_RIF02_62_27, RIF2, Bacteria

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3..1097
DNA (1095bp) protein (365aa)
hypothetical protein Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3D2CC
octaheme cytochrome c
Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
PLM3_60_b1_sep16_scaffold_1252_2
RLO_PLX_64_10, Bacteria

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1236..2111
DNA (876bp) protein (292aa)
PBS lyase HEAT domain protein repeat-containing protein bin=GWA2_OP3_53_43 species=Methanohalobium evestigatum genus=Methanohalobium taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1252_3
unknown

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comp(2150..2869)
DNA (720bp) protein (240aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1252_4
RLO_PLX_64_10, Bacteria

Not on your lists

comp(2921..3952)
DNA (1032bp) protein (344aa)
ddlA; d-alanine-d-alanine ligase (EC:6.3.2.4)
D-alanine-D-alanine ligase Tax=Candidatus Nitrospira defluvii RepID=D8PAJ0_9BACT
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1252_5
RLO_PLX_64_10, Bacteria

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comp(3942..4967)
DNA (1026bp) protein (342aa)
Putative uncharacterized protein Tax=Rhodopirellula baltica (strain SH1) RepID=Q7UHD7_RHOBA
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1252_6
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5058..5834)
DNA (777bp) protein (259aa)
PAS/PAC sensor signal transduction histidine kinase Tax=Sulfuricella denitrificans skB26 RepID=S6B530_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAO35644.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PAS/PAC sensor signal transduction histidine kinase
PLM3_60_b1_sep16_scaffold_1252_7
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(5981..7111)
DNA (1131bp) protein (377aa)
Endoglucanase Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I0V5_AZOC5
Alkaline phosphatase {ECO:0000313|EMBL:BAQ64302.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
endoglucanase
PLM3_60_b1_sep16_scaffold_1252_8
unknown

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comp(7361..8191)
DNA (831bp) protein (277aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1252_9
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(8312..11332)
DNA (3021bp) protein (1007aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PG46_9DELT
pknB1; serine/threonine protein kinase
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_1252_10
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11422..12801)
DNA (1380bp) protein (460aa)
Uncharacterized protein Tax=uncultured bacterium RepID=K1Z8L1_9BACT
Formate hydrogenlyase transcriptional activator {ECO:0000313|EMBL:AKF08482.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
transcriptional regulator
PLM3_60_b1_sep16_scaffold_1252_11
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12981..14462
DNA (1482bp) protein (494aa)
hypothetical protein Tax=Anabaena sp. PCC 7108 RepID=UPI0003473F06
Na-Ca exchanger/integrin-beta4
Uncharacterized protein {ECO:0000313|EMBL:CCI16601.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9807.;"
PLM3_60_b1_sep16_scaffold_1252_12
unknown

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14538..14963
DNA (426bp) protein (142aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1252_13
Anoxybacillus flavithermus, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15082..15393
DNA (312bp) protein (104aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus flavithermus AK1.;"
hypothetical protein Tax=Caldibacillus debilis RepID=UPI00035EBF02
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
PLM3_60_b1_sep16_scaffold_1252_14
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

15481..16215
DNA (735bp) protein (245aa)
RNA methyltransferase, TrmH family, group 3 (EC:2.1.1.-)
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:CBK43773.1}; EC=2.1.1.- {ECO:0000313|EMBL:CBK43773.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI0003610C52
PLM3_60_b1_sep16_scaffold_1252_15
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16231..16728
DNA (498bp) protein (166aa)
Dinb family protein Tax=Pontibacter sp. BAB1700 RepID=J1FEK9_9BACT
Dinb family protein {ECO:0000313|EMBL:EJF08679.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
DinB family protein
PLM3_60_b1_sep16_scaffold_1252_16
unknown

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16728..16820
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 16 items

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