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PLM3_60_b1_sep16_scaffold_1355

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1355_1
unknown

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2..79
DNA (78bp) protein (26aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1355_2
RLO_PLX_64_10, Bacteria

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comp(260..1090)
DNA (831bp) protein (277aa)
Metabolite MFS transporter Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BF9_STIAD
Metabolite MFS transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1355_3
RLO_PLX_64_10, Bacteria

Not on your lists

comp(1041..1529)
DNA (489bp) protein (163aa)
Metabolite MFS transporter Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09BF9_STIAD
Metabolite MFS transporter
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1355_4
unknown

Not on your lists

comp(1559..1759)
DNA (201bp) protein (67aa)
PLM3_60_b1_sep16_scaffold_1355_5
Hymenobacter sp. DG25B, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1761..4478
DNA (2718bp) protein (906aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI000365EE86
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIZ63543.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. DG25B.;"
PLM3_60_b1_sep16_scaffold_1355_6
GWA2_Deltaproteobacteria_55_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4488..6302
DNA (1815bp) protein (605aa)
hypothetical protein Tax=Spirosoma panaciterrae RepID=UPI0003651535
hypothetical protein
Tax=GWA2_Deltaproteobacteria_55_10_curated
PLM3_60_b1_sep16_scaffold_1355_7
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

6646..7005
DNA (360bp) protein (120aa)
PilT protein-like protein; K07062 bin=bin5_DeltaP species=Thioalkalivibrio sp. ALJ17 genus=Thioalkalivibrio taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
PilT domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_60_b1_sep16_scaffold_1355_8
GWA2_WOR_2_53_43_curated, WOR-2, Bacteria

Not on your lists

6998..7453
DNA (456bp) protein (152aa)
tRNA-adenosine deaminase bin=GWA2_OP3_53_43 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
cytosine/adenosine deaminase
Tax=GWA2_WOR_2_53_43_curated
PLM3_60_b1_sep16_scaffold_1355_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(7558..9141)
DNA (1584bp) protein (528aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003777315
cytochrome b/b6 domain-containing protein
Cytochrome b/b6, N-terminal domain {ECO:0000313|EMBL:ABJ87134.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_1355_10
RBG_16_Chloroflexi_60_22_curated, Chloroflexi, Bacteria

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comp(9153..9542)
DNA (390bp) protein (130aa)
putative quinol-cytochrome c reductase iron-sulfur subunit (Rieske iron-sulfur protein) (EC:1.10.2.2)
Putative Quinol-cytochrome c reductase, iron-sulfur subunit (Rieske iron-sulfur protein) Tax=Candidatus Nitrospira defluvii RepID=D8PJI8_9BACT
Tax=RBG_16_Chloroflexi_60_22_curated
PLM3_60_b1_sep16_scaffold_1355_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

9686..10816
DNA (1131bp) protein (377aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Aminomethyltransferase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BS2_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_b1_sep16_scaffold_1355_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10835..11113
DNA (279bp) protein (93aa)
Glycine cleavage system H protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BS3_SOLUE
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_b1_sep16_scaffold_1355_13
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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11390..12733
DNA (1344bp) protein (448aa)
gcvPA; glycine dehydrogenase [decarboxylating] subunit 1 (Glycine decarboxylase subunit 1) (Glycine cleavage system P-protein subunit 1) (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 bin=GWC2_Pelobacter_58_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Tax=GWC2_Deltaproteobacteria_42_11_curated
PLM3_60_b1_sep16_scaffold_1355_14
Brevibacillus borstelensis, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12730..14109
DNA (1380bp) protein (460aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine decarboxylase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; Glycine dehydrogenase (aminomethyl-transferring) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus borstelensis AK1.;"
gcvPB; glycine dehydrogenase [decarboxylating] subunit 2 (Glycine decarboxylase subunit 2) (Glycine cleavage system P-protein subunit 2) (EC:1.4.4.2)
glycine dehydrogenase subunit 2 Tax=Brevibacillus sp. phR RepID=UPI0002D4F674
PLM3_60_b1_sep16_scaffold_1355_15
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

14469..14882
DNA (414bp) protein (138aa)
Uncharacterized protein Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LYX4_HALO1
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_1355_16
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

Not on your lists

15088..15555
DNA (468bp) protein (156aa)
Transcriptional regulator, XRE family Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I4B5_9BACL
transcriptional regulator, XRE family protein
Tax=RBG_13_Aminicenantes_59_9_curated
PLM3_60_b1_sep16_scaffold_1355_17
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

15552..16670
DNA (1119bp) protein (373aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJZ5_CHLTF
hypothetical protein
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_1355_18
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

16677..17441
DNA (765bp) protein (255aa)
Protein phosphatase 2C Tax=Holophaga foetida DSM 6591 RepID=H1P0D4_9BACT
protein phosphatase 2C-like protein
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_1355_19
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

17542..19113
DNA (1572bp) protein (524aa)
protein kinase
Serine/threonine protein kinase with Chase2 sensor bin=GWA2_Elusimicrobia_51_34 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusimicrobia_51_34 organism_group=Elusimicrobia
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_1355_20
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

19103..20065
DNA (963bp) protein (321aa)
Tax=RBG_16_Acidobacteria_70_10_curated
PLM3_60_b1_sep16_scaffold_1355_21
unknown

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comp(20070..20609)
DNA (540bp) protein (180aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1355_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20663..21442
DNA (780bp) protein (260aa)
TsnR Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJH5_9BACT
rRNA methylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_b1_sep16_scaffold_1355_23
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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21462..22109
DNA (648bp) protein (216aa)
id=4214139 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
PLM3_60_b1_sep16_scaffold_1355_24
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22096..22473
DNA (378bp) protein (126aa)
Transcriptional regulator {ECO:0000313|EMBL:ETW99054.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
Transcriptional regulator, ArsR family bin=GWF2_Lentisphaerae_57_35 species=Isosphaera pallida genus=Isosphaera taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
PLM3_60_b1_sep16_scaffold_1355_25
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

22532..23653
DNA (1122bp) protein (374aa)
hypothetical protein Tax=Flexithrix dorotheae RepID=UPI00037ACC14
Uncharacterized protein {ECO:0000313|EMBL:ETT37235.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
putative membrane protein
Displaying 25 items

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