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PLM3_60_b1_sep16_scaffold_1425

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1425_1
unknown

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2..283
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1425_2
RLO_PLX_64_10, Bacteria

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comp(449..1390)
DNA (942bp) protein (314aa)
GDP-L-fucose synthase Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IJX1_THETR
nucleoside-diphosphate-sugar epimerase
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1425_3
unknown

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1406..1525
DNA (120bp) protein (40aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1425_4
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1551..2420)
DNA (870bp) protein (290aa)
CDP-paratose 2-epimerase (EC:5.1.3.10)
NAD-dependent epimerase Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5C1Q4_9BACT
NAD-dependent epimerase {ECO:0000313|EMBL:ERM83998.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
PLM3_60_b1_sep16_scaffold_1425_5
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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comp(2461..4332)
DNA (1872bp) protein (624aa)
putative aminopeptidase (EC:3.4.17.21)
Putative aminopeptidase {ECO:0000313|EMBL:AEP12035.1}; EC=3.4.17.21 {ECO:0000313|EMBL:AEP12035.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Putative aminopeptidase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEQ2_CHLTF
PLM3_60_b1_sep16_scaffold_1425_6
RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated, Nitrospirae, Bacteria

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comp(4470..5555)
DNA (1086bp) protein (362aa)
purM; phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (Phosphoribosyl-aminoimidazole synthetase) (AIR synthase) (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MJN2_9BACT
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_41_18_curated
PLM3_60_b1_sep16_scaffold_1425_7
RBG_16_Zixibacteria_43_9_curated, Zixibacteria, Bacteria

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comp(5558..6502)
DNA (945bp) protein (315aa)
family 2 glycosyl transferase bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
glycosyl transferase family 2 protein
Tax=RBG_16_Zixibacteria_43_9_curated
PLM3_60_b1_sep16_scaffold_1425_8
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

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6601..7515
DNA (915bp) protein (305aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI00036BE41B
ABC transporter-like protein
Tax=RBG_13_Aminicenantes_63_10_curated
PLM3_60_b1_sep16_scaffold_1425_9
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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7512..8276
DNA (765bp) protein (255aa)
hypothetical protein bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative ABC transporter permease
Tax=RBG_13_Aminicenantes_62_12_curated
PLM3_60_b1_sep16_scaffold_1425_10
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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8273..9142
DNA (870bp) protein (290aa)
hypothetical protein Tax=Aminicenantes RepID=UPI00036723F7
hypothetical protein
Tax=RBG_13_Aminicenantes_59_9_curated
PLM3_60_b1_sep16_scaffold_1425_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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9139..10512
DNA (1374bp) protein (458aa)
Two component, sigma54 specific, transcriptional regulator, Fis family bin=GWF2_Nitrospirae_44_13 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
two component, sigma54 specific, Fis family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_b1_sep16_scaffold_1425_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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comp(10724..12298)
DNA (1575bp) protein (525aa)
4-coumarate--CoA ligase (EC:6.2.1.12)
4-coumarate--CoA ligase Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SH91_RHOMR
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
PLM3_60_b1_sep16_scaffold_1425_13
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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12363..13187
DNA (825bp) protein (275aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003787C23
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_b1_sep16_scaffold_1425_14
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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13181..15007
DNA (1827bp) protein (609aa)
Serine/threonine protein kinase bin=GWA2_Ignavibacteria_55_11 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
serine/threonine protein kinase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_b1_sep16_scaffold_1425_15
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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comp(15017..16285)
DNA (1269bp) protein (423aa)
Transcriptional regulator with HTH domain and aminotransferase domain Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QUP7_NOSS7
transcriptional regulator with HTH domain and aminotransferase domain
Transcriptional regulator with HTH domain and aminotransferase domain {ECO:0000313|EMBL:AFY48522.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
PLM3_60_b1_sep16_scaffold_1425_16
Nostoc sp. PCC 7524, Nostoc, Nostocales, Cyanobacteria, Bacteria

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16414..17034
DNA (621bp) protein (207aa)
Putative flavin-nucleotide-binding protein Tax=Nostoc sp. (strain ATCC 29411 / PCC 7524) RepID=K9QSY8_NOSS7
flavin-nucleotide-binding protein
Putative flavin-nucleotide-binding protein {ECO:0000313|EMBL:AFY48523.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. (strain ATCC 29411 / PCC 7524).;"
PLM3_60_b1_sep16_scaffold_1425_17
Nitrosospira sp. NpAV, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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17248..17988
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2S341_9DELT
Proline hydroxylase {ECO:0000313|EMBL:KIO47928.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;"
hypothetical protein
PLM3_60_b1_sep16_scaffold_1425_18
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18022..19101)
DNA (1080bp) protein (360aa)
GDSL-like Lipase/Acylhydrolase Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4J3_DESTA
GDSL-like Lipase/Acylhydrolase
GDSL-like Lipase/Acylhydrolase {ECO:0000313|EMBL:AFM24484.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfomonile.;" source="Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1).;"
PLM3_60_b1_sep16_scaffold_1425_19
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(19141..20277)
DNA (1137bp) protein (379aa)
Uncharacterized protein bin=CD_OP8_4m species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
PLM3_60_b1_sep16_scaffold_1425_20
RBG_19FT_COMBO_Aminicenantes_59_29_curated, Aminicenantes, Bacteria

Not on your lists

comp(20290..21495)
DNA (1206bp) protein (402aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
ABC transporter
Tax=RBG_19FT_COMBO_Aminicenantes_59_29_curated
PLM3_60_b1_sep16_scaffold_1425_21
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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comp(21492..22298)
DNA (807bp) protein (269aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
ABC transporter
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_1425_22
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

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comp(22326..23030)
DNA (705bp) protein (235aa)
methyltransferase (EC:2.1.1.-); K00599 [EC:2.1.1.-] bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
SAM-dependent methyltransferase
Tax=RBG_16_Aminicenantes_63_16_curated
PLM3_60_b1_sep16_scaffold_1425_23
unknown

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comp(23048..23350)
DNA (303bp) protein (101aa)

This feature has no annotations

Displaying 23 items

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