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PLM3_60_b1_sep16_scaffold_1567

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1567_1
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..552
DNA (552bp) protein (184aa)
Cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) {ECO:0000313|EMBL:CCE03352.1}; EC=2.8.1.7 {ECO:0000313|EMBL:CCE03352.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
nifS; cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase (Nitrogenase metalloclusters biosynthesis protein nifS) Tax=Bradyrhizobium sp. STM 3809 RepID=H0TA75_9BRAD
PLM3_60_b1_sep16_scaffold_1567_2
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

549..1037
DNA (489bp) protein (163aa)
FOG: FHA domain Tax=Microbacterium testaceum (strain StLB037) RepID=E8N914_MICTS
FHA domain
Tax=RBG_13_OP8X_37_8_curated
PLM3_60_b1_sep16_scaffold_1567_3
RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated, Acidobacteria, Bacteria

Not on your lists

1113..2189
DNA (1077bp) protein (359aa)
mnmA; tRNA-specific 2-thiouridylase MnmA (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA Tax=Solibacter usitatus (strain Ellin6076) RepID=MNMA_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_54_10_curated
PLM3_60_b1_sep16_scaffold_1567_4
RLO_RIF03_38_15, RIF3, Bacteria

Not on your lists

comp(2218..3480)
DNA (1263bp) protein (421aa)
phosphomannomutase (EC:5.4.2.8)
Phosphomannomutase/phosphoglucomutase Tax=uncultured Desulfobacterium sp. RepID=E1YC29_9DELT
Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
PLM3_60_b1_sep16_scaffold_1567_5
R_Acidobacteria_67_28, Acidobacteria, Bacteria

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comp(3559..4269)
DNA (711bp) protein (237aa)
amidohydrolase; K07045 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
amidohydrolase
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
PLM3_60_b1_sep16_scaffold_1567_6
unknown

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4608..5252
DNA (645bp) protein (215aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1567_7
Hydrogenobacter thermophilus, Hydrogenobacter, Aquificales, Aquificae, Aquificae, Bacteria

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5334..5741
DNA (408bp) protein (136aa)
Uncharacterized protein Tax=Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) RepID=D3DFE3_HYDTT
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAI68545.1}; species="Bacteria; Aquificae; Aquificales; Aquificaceae; Hydrogenobacter.;" source="Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6).;"
PLM3_60_b1_sep16_scaffold_1567_8
RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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5763..6392
DNA (630bp) protein (210aa)
Phospholipase D/transphosphatidylase Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M359_GEODF
phospholipase D/transphosphatidylase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_55_16_curated
PLM3_60_b1_sep16_scaffold_1567_9
unknown

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6389..7000
DNA (612bp) protein (204aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1567_10
Strongylocentrotus purpuratus, Strongylocentrotus, Echinoida, Euechinoidea, Echinodermata, Metazoa

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comp(7011..8354)
DNA (1344bp) protein (448aa)
Uncharacterized protein Tax=Amphimedon queenslandica RepID=I1GHI4_AMPQE
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:SPU_020455-tr}; species="Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Echinoida; Strongylocentrotidae; Strongylocentrotus.;" source="Strongylocentrotus purpuratus (Purple sea urchin).;"
ankyrin repeat-containing protein
PLM3_60_b1_sep16_scaffold_1567_11
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8457..9044
DNA (588bp) protein (196aa)
Sua5/YciO/YrdC/YwlC bin=GWC2_Deltaproteobacteria_42_51 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
Sua5/YciO/YrdC/YwlC family protein
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
PLM3_60_b1_sep16_scaffold_1567_12
unknown

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9025..9879
DNA (855bp) protein (285aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1567_13
unknown

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9876..10436
DNA (561bp) protein (187aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1567_14
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

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10651..11139
DNA (489bp) protein (163aa)
Uncharacterized protein bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
PLM3_60_b1_sep16_scaffold_1567_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11136..12092)
DNA (957bp) protein (319aa)
Uncharacterized protein Tax=Enterococcus gallinarum EGD-AAK12 RepID=U1CZQ7_ENTGA
SAM-dependent methyltransferase
Tax=RBG_13_Pacearchaeota_36_9_curated
PLM3_60_b1_sep16_scaffold_1567_16
R_Deltaproteobacteria_50_16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12158..12877
DNA (720bp) protein (240aa)
Short-chain dehydrogenase/reductase SDR Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM57_9BACT
short-chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_50_16_curated
PLM3_60_b1_sep16_scaffold_1567_17
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12881..13567
DNA (687bp) protein (229aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
Uncharacterized protein {ECO:0000313|EMBL:ETW96529.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
gcvT1; glycine cleavage system T protein
PLM3_60_b1_sep16_scaffold_1567_18
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

13551..13856
DNA (306bp) protein (102aa)
putative aminomethyltransferase (EC:2.1.2.10); K00605 aminomethyltransferase [EC:2.1.2.10] bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin1_lowGC organism_group=Unknown_CP
folate-binding protein YgfZ
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_60_b1_sep16_scaffold_1567_19
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

13860..14075
DNA (216bp) protein (72aa)
glcG protein bin=bin1_lowGC species=Dasania marina genus=Dasania taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=CSP1_2_Dadabacteria
Displaying 19 items

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