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PLM3_60_b1_sep16_scaffold_1711

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1711_1
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

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2..268
DNA (267bp) protein (89aa)
glcG protein bin=bin1_lowGC species=Dasania marina genus=Dasania taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
hypothetical protein
Tax=RBG_13_Bathyarchaeota_38_9_curated
PLM3_60_b1_sep16_scaffold_1711_2
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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485..2113
DNA (1629bp) protein (543aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM66429.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CDM66429.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35] bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin9_gal15 organism_group=GAL15
3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.17)
PLM3_60_b1_sep16_scaffold_1711_3
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2098..2655
DNA (558bp) protein (186aa)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:CDM66429.1}; EC=1.1.1.35 {ECO:0000313|EMBL:CDM66429.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain protein bin=GWC2_Proteo_65_14_Ab886 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
PLM3_60_b1_sep16_scaffold_1711_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2791..3963
DNA (1173bp) protein (391aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:CDM66430.1}; EC=2.3.1.16 {ECO:0000313|EMBL:CDM66430.1};; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
acetyl-CoA acetyltransferase (EC:2.3.1.16)
Acetyl-CoA C-acetyltransferase Tax=uncultured Acidobacteria bacterium RepID=H5SH83_9BACT
PLM3_60_b1_sep16_scaffold_1711_5
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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4096..5850
DNA (1755bp) protein (585aa)
Acyl-CoA dehydrogenase Tax=uncultured Acidobacteria bacterium RepID=H5SH82_9BACT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:BAL55518.1}; species="Bacteria; Acidobacteria; environmental samples.;" source="uncultured Acidobacteria bacterium.;"
butyryl-CoA dehydrogenase
PLM3_60_b1_sep16_scaffold_1711_6
unknown

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5816..6397
DNA (582bp) protein (194aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1711_7
RLO_Nitrospinae_39_15, Nitrospinae, Bacteria

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6512..7990
DNA (1479bp) protein (493aa)
lysS; Lysyl-tRNA synthetase (LysRS) (EC:6.1.1.6) bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
lysS; lysine--tRNA ligase (EC:6.1.1.6)
Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated
PLM3_60_b1_sep16_scaffold_1711_8
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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8060..9289
DNA (1230bp) protein (410aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family Tax=delta proteobacterium NaphS2 RepID=D8EXW8_9DELT
lolE; lipoprotein release ABC transporter membrane protein
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
PLM3_60_b1_sep16_scaffold_1711_9
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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9282..9995
DNA (714bp) protein (238aa)
Lipopolysaccharide transport system ATP-binding protein Tax=uncultured Acidobacteria bacterium RepID=H5SDC2_9BACT
ABC transporter-like protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3_60_b1_sep16_scaffold_1711_10
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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10229..11011
DNA (783bp) protein (261aa)
ATPase; K03696 ATP-dependent Clp protease ATP-binding subunit ClpC bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
clpC; ATP-dependent Clp protease, ATP-binding subunit ClpC
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_b1_sep16_scaffold_1711_11
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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11098..12537
DNA (1440bp) protein (480aa)
ATP-dependent Clp protease ATP-binding protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00035FB1B5
ATPase AAA
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_b1_sep16_scaffold_1711_12
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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12591..12968
DNA (378bp) protein (126aa)
Uncharacterized protein (Fragment) Tax=uncultured bacterium RepID=K1ZBR7_9BACT
outer membrane protein assembly complex, YaeT protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
PLM3_60_b1_sep16_scaffold_1711_13
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

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12989..14014
DNA (1026bp) protein (342aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA252-O11 RepID=UPI0003731C72
membrane protein
Tax=RBG_13_OP8X_37_8_curated
Displaying 13 items

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