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PLM3_60_b1_sep16_scaffold_1843

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_1843_1
R_Acidobacteria_65_29, Acidobacteria, Bacteria

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comp(2..1156)
DNA (1155bp) protein (385aa)
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_b1_sep16_scaffold_1843_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(1477..2946)
DNA (1470bp) protein (490aa)
Aldehyde dehydrogenase (Acceptor) {ECO:0000313|EMBL:ABF40537.1}; EC=1.2.99.3 {ECO:0000313|EMBL:ABF40537.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Aldehyde dehydrogenase (Acceptor) Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG3_KORVE
aldehyde dehydrogenase
PLM3_60_b1_sep16_scaffold_1843_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(3215..4564)
DNA (1350bp) protein (450aa)
Amino acid/polyamine/organocation transporter, APC superfamily Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG2_KORVE
amino acid transporter
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:ABF40538.1}; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_60_b1_sep16_scaffold_1843_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4561..5934)
DNA (1374bp) protein (458aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:ABF40539.1}; EC=5.4.3.8 {ECO:0000313|EMBL:ABF40539.1};; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
Glutamate-1-semialdehyde 2,1-aminomutase Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IRG1_KORVE
glutamate-1-semialdehyde 2,1-aminomutase
PLM3_60_b1_sep16_scaffold_1843_5
R_WOR_2_68_15, WOR-2, Bacteria

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6087..6329
DNA (243bp) protein (81aa)
Putative uncharacterized protein bin=GWC2_OP3_44_8 species=sediment metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_68_15_curated
PLM3_60_b1_sep16_scaffold_1843_6

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comp(6417..8633)
DNA (2217bp) protein (739aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN38371.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein bin=CD_OP8_4m species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
sulfatase
PLM3_60_b1_sep16_scaffold_1843_7
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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comp(8648..9616)
DNA (969bp) protein (323aa)
Quinolinate synthase A Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HFV1_ANADF
quinolinate synthetase
Tax=BJP_IG2102_BRC1_58_13
PLM3_60_b1_sep16_scaffold_1843_8
RLO_PLX_64_10, Bacteria

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comp(9618..9818)
DNA (201bp) protein (67aa)
Putative uncharacterized protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IEV8_ANADE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_b1_sep16_scaffold_1843_9
unknown

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9847..10185
DNA (339bp) protein (113aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1843_10
R_Dadabacteria_53_21, Dadabacteria, Bacteria

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comp(10192..10935)
DNA (744bp) protein (248aa)
putative anti-sigma factor bin=bin7_NC10_sister species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
PLM3_60_b1_sep16_scaffold_1843_11
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(10928..11497)
DNA (570bp) protein (190aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HNZ8_CYAP4
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
ECF subfamily RNA polymerase sigma-24 subunit
PLM3_60_b1_sep16_scaffold_1843_12
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11672..12544
DNA (873bp) protein (291aa)
hypothetical protein Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000347FACF
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_60_b1_sep16_scaffold_1843_13
unknown

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comp(12603..13460)
DNA (858bp) protein (286aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_1843_14

Not on your lists

comp(13457..13909)
DNA (453bp) protein (151aa)
Marine sediment metagenome DNA, contig: S06H3_L06540 {ECO:0000313|EMBL:GAI02837.1}; Flags: Fragment;; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PLM3_60_b1_sep16_scaffold_1843_15
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(14270..14932)
DNA (663bp) protein (221aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGT9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11200.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_60_b1_sep16_scaffold_1843_16
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

comp(14874..15488)
DNA (615bp) protein (205aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LGT9_CHLTF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEP11200.1}; species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
PLM3_60_b1_sep16_scaffold_1843_17
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(15821..16900)
DNA (1080bp) protein (360aa)
ABC transporter, ATPase subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQI2_KORVE
ABC transporter ATPase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_60_b1_sep16_scaffold_1843_18
Psychromonas sp. CNPT3, Psychromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16897..18015)
DNA (1119bp) protein (373aa)
Uncharacterized protein Tax=Psychromonas sp. CNPT3 RepID=M4U815_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH82364.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Psychromonadaceae; Psychromonas.;" source="Psychromonas sp. CNPT3.;"
PLM3_60_b1_sep16_scaffold_1843_19
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(18012..18881)
DNA (870bp) protein (290aa)
ABC efflux pump, inner membrane subunit Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQI0_KORVE
efflux ABC transporter inner membrane protein
ABC efflux pump, inner membrane subunit {ECO:0000313|EMBL:ABF40870.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345).;"
PLM3_60_b1_sep16_scaffold_1843_20
Klebsiella oxytoca, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19024..19218)
DNA (195bp) protein (65aa)
Uncharacterized protein Tax=Klebsiella oxytoca RepID=V3L5X3_KLEOX
putative ABC transporter permease component
Uncharacterized protein {ECO:0000313|EMBL:EHS96362.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella oxytoca 10-5245.;"
PLM3_60_b1_sep16_scaffold_1843_21
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(19251..20504)
DNA (1254bp) protein (418aa)
iron permease Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B32ADC
iron permease
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
PLM3_60_b1_sep16_scaffold_1843_22
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20494..20952)
DNA (459bp) protein (153aa)
Ferric uptake regulator, Fur family Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LIM7_HALO1
Fur family ferric uptake regulator
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:ACY18383.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2).;"
Displaying 22 items

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