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PLM3_60_b1_sep16_scaffold_3567

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_3567_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3..956)
DNA (954bp) protein (318aa)
Radical SAM superfamily protein, putative Coenzyme PQQ synthesis protein E Tax=Candidatus Nitrospira defluvii RepID=D8PAS6_9BACT
radical SAM protein
Radical SAM superfamily protein, putative Coenzyme PQQ synthesis protein E {ECO:0000313|EMBL:CBK40335.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_3567_2
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(1069..3072)
DNA (2004bp) protein (668aa)
Putative Universal stress protein UspA (Modular protein) Tax=Candidatus Nitrospira defluvii RepID=D8PAS7_9BACT
putative universal stress protein UspA
Putative Universal stress protein UspA (Modular protein) {ECO:0000313|EMBL:CBK40336.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_3567_3
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(3233..4873)
DNA (1641bp) protein (547aa)
Radical SAM superfamily protein Tax=Candidatus Nitrospira defluvii RepID=D8PAS8_9BACT
radical SAM protein
Radical SAM superfamily protein {ECO:0000313|EMBL:CBK40337.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_3567_4
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(4948..5451)
DNA (504bp) protein (168aa)
ubiE; Ubiquinone/menaquinone biosynthesis methyltransferase (EC:2.1.1.-)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Demethylmenaquinone methyltransferase Tax=Candidatus Nitrospira defluvii RepID=D8PAS9_9BACT
PLM3_60_b1_sep16_scaffold_3567_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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5743..8340
DNA (2598bp) protein (866aa)
Excinuclease ABC, subunit A Tax=Candidatus Nitrospira defluvii RepID=D8PAT3_9BACT
UvrABC system protein A {ECO:0000256|SAAS:SAAS00088996}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
uvrA; excinuclease ABC subunit A
PLM3_60_b1_sep16_scaffold_3567_6
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

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8345..8662
DNA (318bp) protein (106aa)
Uncharacterized protein Tax=Ktedonobacter racemifer DSM 44963 RepID=D6U1C8_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH80779.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
PLM3_60_b1_sep16_scaffold_3567_7
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8926..9234
DNA (309bp) protein (103aa)
Putative membrane protein, clustering with ActP {ECO:0000313|EMBL:CDS51684.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
Uncharacterized protein bin=GWE1_Burkholderiales_65_30 species=unknown genus=Rubrivivax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
PLM3_60_b1_sep16_scaffold_3567_8
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9231..10970
DNA (1740bp) protein (580aa)
Acetate permease Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLR0_9BURK
Acetate permease {ECO:0000313|EMBL:EGJ09278.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
actP; cation/acetate symporter ActP
PLM3_60_b1_sep16_scaffold_3567_9
unknown

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11449..11538
DNA (90bp) protein (30aa)

This feature has no annotations

Displaying 9 items

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