ggKbase home page

PLM3_60_b1_sep16_scaffold_5308

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_b1_sep16_scaffold_5308_1
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(3..215)
DNA (213bp) protein (71aa)
Glycoside hydrolase, family 57 Tax=Candidatus Nitrospira defluvii RepID=D8PIJ1_9BACT
glycoside hydrolase family 57 protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
PLM3_60_b1_sep16_scaffold_5308_2
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

272..694
DNA (423bp) protein (141aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PIJ0_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_5308_3
unknown

Not on your lists

819..1034
DNA (216bp) protein (72aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_5308_4
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

1301..1624
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PG43_9BACT
hypothetical protein
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_5308_5
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

2006..3109
DNA (1104bp) protein (368aa)
putative phosphotransferase (EC:2.7.1.-)
Putative Phosphotransferase {ECO:0000313|EMBL:CBK43075.1}; EC=2.7.1.- {ECO:0000313|EMBL:CBK43075.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Phosphotransferase Tax=Candidatus Nitrospira defluvii RepID=D8PII8_9BACT
PLM3_60_b1_sep16_scaffold_5308_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3152..3916
DNA (765bp) protein (255aa)
putative nucleotidyl transferase (EC:2.7.7.-)
Putative Nucleotidyl transferase {ECO:0000313|EMBL:CBK43074.1}; EC=2.7.7.- {ECO:0000313|EMBL:CBK43074.1};; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
Putative Nucleotidyl transferase Tax=Candidatus Nitrospira defluvii RepID=D8PII7_9BACT
PLM3_60_b1_sep16_scaffold_5308_7
unknown

Not on your lists

3921..4292
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_60_b1_sep16_scaffold_5308_8
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(4125..5495)
DNA (1371bp) protein (457aa)
Sigma-54 dependent transcriptional regulator Tax=Candidatus Nitrospira defluvii RepID=D8PII6_9BACT
sigma-54 dependent transcriptional regulator
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_5308_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(5602..6927)
DNA (1326bp) protein (442aa)
Uncharacterized protein Tax=Candidatus Nitrospira defluvii RepID=D8PII5_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK43072.1}; species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
PLM3_60_b1_sep16_scaffold_5308_10
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(7051..8055)
DNA (1005bp) protein (335aa)
polyprenyl-diphosphate synthase (EC:2.5.1.-)
Polyprenyl-diphosphate synthase Tax=Candidatus Nitrospira defluvii RepID=D8PII4_9BACT
Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
PLM3_60_b1_sep16_scaffold_5308_11
unknown

Not on your lists

8063..8146
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 11 items

View Taxonomy