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PLM3_60_coex_sep16_scaffold_6303

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_6303_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2..142)
DNA (141bp) protein (47aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI0003764C93
Uncharacterized protein {ECO:0000313|EMBL:BAR58614.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
PLM3_60_coex_sep16_scaffold_6303_2
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(127..624)
DNA (498bp) protein (166aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6S7_BRAJP
Uncharacterized protein {ECO:0000313|EMBL:BAR62918.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_6303_3
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(822..1226)
DNA (405bp) protein (135aa)
hypothetical protein Tax=Thalassospira lucentensis RepID=UPI0003B523C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEO53592.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira permensis NBRC 106175.;"
PLM3_60_coex_sep16_scaffold_6303_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1751..2170)
DNA (420bp) protein (140aa)
trxA; thioredoxin (EC:1.8.1.9)
Thioredoxin Tax=Oscillibacter sp. CAG:241 RepID=R6HHP5_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
PLM3_60_coex_sep16_scaffold_6303_5
Neisseria meningitidis, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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2431..3114
DNA (684bp) protein (228aa)
Sel1 repeat protein Tax=Neisseria meningitidis 93003 RepID=J8WAF5_NEIME
Sel1 repeat protein {ECO:0000313|EMBL:EJU51786.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria.;" source="Neisseria meningitidis 93003.;"
putative exported Sel1 domain protein
PLM3_60_coex_sep16_scaffold_6303_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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3089..3781
DNA (693bp) protein (231aa)
Uncharacterized protein Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESM2_AMOA5
hypothetical protein
Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
PLM3_60_coex_sep16_scaffold_6303_7
unknown

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3763..3954
DNA (192bp) protein (64aa)
hypothetical protein
PLM3_60_coex_sep16_scaffold_6303_8
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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4040..4687
DNA (648bp) protein (216aa)
Uncharacterized protein Tax=Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM 13430 / M1) RepID=D3E3X8_METRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC47239.1}; species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
PLM3_60_coex_sep16_scaffold_6303_9
unknown

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comp(4696..5454)
DNA (759bp) protein (253aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6303_10
Roseibacterium elongatum, Roseibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5462..8707)
DNA (3246bp) protein (1082aa)
UPI0003CFF5ED related cluster Tax=unknown RepID=UPI0003CFF5ED
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AHM03580.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibacterium.;" source="Roseibacterium elongatum DSM 19469.;"
PLM3_60_coex_sep16_scaffold_6303_11
unknown

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comp(8811..9182)
DNA (372bp) protein (124aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_6303_12
RBG_13_Chloroflexi_48_17_curated, Chloroflexi, Bacteria

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comp(9642..9953)
DNA (312bp) protein (104aa)
pectate lyase-like protein Tax=Aquimarina agarilytica RepID=UPI000288F82E
hypothetical protein
Tax=RBG_13_Chloroflexi_48_17_curated
Displaying 12 items

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