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PLM3_60_coex_sep16_scaffold_21

Search features with annotation key words

Displaying items 1-30 of 168 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_21_1
Mesorhizobium sp. STM 4661, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9..860)
DNA (852bp) protein (284aa)
Metal-dependent phosphohydrolase HD region Tax=Mesorhizobium sp. STM 4661 RepID=M5F7G2_9RHIZ
Metal-dependent phosphohydrolase HD region {ECO:0000313|EMBL:CCV12370.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. STM 4661.;"
metal-dependent phosphohydrolase
PLM3_60_coex_sep16_scaffold_21_2
unknown

Not on your lists

comp(1231..1593)
DNA (363bp) protein (121aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_3
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1846..2013)
DNA (168bp) protein (56aa)
putative integral membrane protein (EC:4.6.1.1)
UPI0003CFC54F related cluster Tax=unknown RepID=UPI0003CFC54F
Adenylate cyclase {ECO:0000313|EMBL:ESZ21724.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
PLM3_60_coex_sep16_scaffold_21_4
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2310..2522)
DNA (213bp) protein (71aa)
radical SAM protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_21_5
unknown

Not on your lists

comp(2700..2975)
DNA (276bp) protein (92aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_6
unknown

Not on your lists

comp(3091..3372)
DNA (282bp) protein (94aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_7
unknown

Not on your lists

comp(3382..3522)
DNA (141bp) protein (47aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4347..4553)
DNA (207bp) protein (69aa)
Uncharacterized protein Tax=Bacillus cereus m1293 RepID=C2MRC7_BACCE
Uncharacterized protein {ECO:0000313|EMBL:EEK43019.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus m1293.;"
DNA repair ATPase
PLM3_60_coex_sep16_scaffold_21_9
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4813..5463)
DNA (651bp) protein (217aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI00037C0B70
transport-associated
Transport-associated protein {ECO:0000313|EMBL:ABE62717.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
PLM3_60_coex_sep16_scaffold_21_10
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6013..7383)
DNA (1371bp) protein (457aa)
hypothetical protein Tax=Mesorhizobium sp. WSM4349 RepID=UPI000376E777
Transposase {ECO:0000313|EMBL:KJC46680.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
transposase
PLM3_60_coex_sep16_scaffold_21_11
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8086..8409)
DNA (324bp) protein (108aa)
Uncharacterized protein Tax=Lutibaculum baratangense AMV1 RepID=V4TI99_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR25728.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
cytochrome c-family protein
PLM3_60_coex_sep16_scaffold_21_12
unknown

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comp(8517..8678)
DNA (162bp) protein (54aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_13
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9512..10075
DNA (564bp) protein (188aa)
hemerythrin Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DFA0F
hemerythrin HHE cation binding region
Uncharacterized protein {ECO:0000313|EMBL:KGJ67951.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_60_coex_sep16_scaffold_21_14
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10096..11232
DNA (1137bp) protein (379aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALJ6 RepID=UPI0003765289
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAR34049.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA).;"
PLM3_60_coex_sep16_scaffold_21_15
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11531..12349)
DNA (819bp) protein (273aa)
MltA-interacting MipA family protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TTZ4_TISMK
Uncharacterized protein {ECO:0000313|EMBL:KGM31829.1}; Flags: Fragment;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
MltA-interacting MipA family protein
PLM3_60_coex_sep16_scaffold_21_16
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

13101..14105
DNA (1005bp) protein (335aa)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037782C6
alcohol dehydrogenase GroES-like protein
Alcohol dehydrogenase GroES-like protein {ECO:0000313|EMBL:ABG03037.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_21_17
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14327..14650)
DNA (324bp) protein (108aa)
Putative cytochrome c552 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IR37_RHOP2
putative cytochrome c552 precursor
Putative cytochrome c552 {ECO:0000313|EMBL:ABD09323.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
PLM3_60_coex_sep16_scaffold_21_18
unknown

Not on your lists

15013..15414
DNA (402bp) protein (134aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_19
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15518..16078
DNA (561bp) protein (187aa)
hemerythrin Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DFA0F
hemerythrin HHE cation binding region
Hemerythrin HHE cation binding region {ECO:0000313|EMBL:ABE38716.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
PLM3_60_coex_sep16_scaffold_21_20
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16423..16746)
DNA (324bp) protein (108aa)
DsrE family protein Tax=Afipia sp. 1NLS2 RepID=D6V498_9BRAD
DsrE family protein {ECO:0000313|EMBL:EFI52778.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
DsrE family protein
PLM3_60_coex_sep16_scaffold_21_21
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16778..17140)
DNA (363bp) protein (121aa)
Uncharacterized protein Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KYE6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPC00389.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_21_22
Vibrio fluvialis, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17411..17962
DNA (552bp) protein (184aa)
hypothetical protein Tax=Rhizobium giardinii RepID=UPI00035F8318
Uncharacterized protein {ECO:0000313|EMBL:EPP23436.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio fluvialis PG41.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_21_23
unknown

Not on your lists

18358..18723
DNA (366bp) protein (122aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_24
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18777..19781)
DNA (1005bp) protein (335aa)
Uncharacterized protein Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F2E7_9PROT
conserved protein of unknown function[Include Endonuclease/Exonuclease/phosphatase family dimain]
Uncharacterized protein {ECO:0000313|EMBL:CCQ74950.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM3_60_coex_sep16_scaffold_21_25
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20283..20969
DNA (687bp) protein (229aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Theronine dehydrogenase-like Zn-dependent dehydrogenase Tax=Microvirga sp. WSM3557 RepID=I4YV94_9RHIZ
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:EIM27886.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
PLM3_60_coex_sep16_scaffold_21_26
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20991..21356
DNA (366bp) protein (122aa)
adh; alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase Tax=Azospirillum sp. (strain B510) RepID=D3P0Z9_AZOS1
NADP-dependent alcohol dehydrogenase {ECO:0000313|EMBL:KJB97578.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PLM3_60_coex_sep16_scaffold_21_27
unknown

Not on your lists

21431..21607
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_21_28
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21999..23555
DNA (1557bp) protein (519aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHX1_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:EWY37712.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_21_29
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23527..24213)
DNA (687bp) protein (229aa)
Protein-L-isoaspartate O-methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000255|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase 2 {ECO:0000255|HAMAP-Rule:MF_00090}; Short=PIMT 2 {ECO:0000255|HAMAP-Rule:MF_00090};; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
Protein-L-isoaspartate O-methyltransferase 2 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=PIMT2_SYNFM
protein-L-isoaspartate O-methyltransferase
PLM3_60_coex_sep16_scaffold_21_30
R_Gamma2_60_33, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24210..25412)
DNA (1203bp) protein (401aa)
Archaeal S-adenosylmethionine synthetase Tax=Pleurocapsa sp. PCC 7327 RepID=K9T147_9CYAN
archaeal S-adenosylmethionine synthetase
Tax=RIFCSPHIGHO2_12_FULL_Gamma2_60_33_curated
Displaying items 1-30 of 168 in total

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