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PLM3_60_coex_sep16_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_24_1
unknown

Not on your lists

comp(177..536)
DNA (360bp) protein (120aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_24_2
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(533..1576)
DNA (1044bp) protein (348aa)
aminoglycoside phosphotransferase Tax=Methylobacterium sp. 285MFTsu5.1 RepID=UPI000376E106
Aminoglycoside phosphotransferase
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:AIQ92868.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
PLM3_60_coex_sep16_scaffold_24_3
SAR116 cluster alpha proteobacterium HIMB100, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1592..2791)
DNA (1200bp) protein (400aa)
Acyl-CoA dehydrogenase Tax=SAR116 cluster alpha proteobacterium HIMB100 RepID=G6A1D5_9PROT
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EHI48520.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster.;" source="SAR116 cluster alpha proteobacterium HIMB100.;"
putative acyl-CoA dehydrogenase
PLM3_60_coex_sep16_scaffold_24_4
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2873..6052)
DNA (3180bp) protein (1060aa)
Putative component of multidrug efflux pump,acrB/acrD/acrF family Tax=Azospirillum brasilense Sp245 RepID=G8ARF8_AZOBR
Transporter {ECO:0000313|EMBL:EWY40560.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative component of multidrug efflux pump,acrB/acrD/acrF family
PLM3_60_coex_sep16_scaffold_24_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6070..7332)
DNA (1263bp) protein (421aa)
Putative component of multidrug efflux pump,acrB/acrD/acrF family Tax=Azospirillum brasilense Sp245 RepID=G8ARF7_AZOBR
Secretion protein HylD {ECO:0000313|EMBL:KJB95767.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative component of multidrug efflux pump,acrB/acrD/acrF family
PLM3_60_coex_sep16_scaffold_24_6
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(7617..8888)
DNA (1272bp) protein (424aa)
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI0003184F12
cysteine desulfurase
Tax=RBG_16_Chloroflexi_57_11_curated
PLM3_60_coex_sep16_scaffold_24_7
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8928..10178)
DNA (1251bp) protein (417aa)
Hydroxypyruvate reductase Tax=Oceanibaculum indicum P24 RepID=K2JKG5_9PROT
Hydroxypyruvate reductase {ECO:0000313|EMBL:KJB94205.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
hfr; hydroxypyruvate reductase
PLM3_60_coex_sep16_scaffold_24_8
Alcaligenes faecalis, Alcaligenes, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10175..10960)
DNA (786bp) protein (262aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Alcaligenes.;" source="Alcaligenes faecalis.;"
Hydroxypyruvate isomerase Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2IVD8_PSEUL
hydroxypyruvate isomerase
PLM3_60_coex_sep16_scaffold_24_9
Azoarcus sp. KH32C, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11140..12141
DNA (1002bp) protein (334aa)
Probable allantoicase {ECO:0000256|HAMAP-Rule:MF_00813}; EC=3.5.3.4 {ECO:0000256|HAMAP-Rule:MF_00813};; Allantoate amidinohydrolase {ECO:0000256|HAMAP-Rule:MF_00813}; species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. KH32C.;"
allantoicase Tax=Burkholderia kururiensis RepID=UPI000348E09F
alc; allantoicase
PLM3_60_coex_sep16_scaffold_24_10
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12150..12650
DNA (501bp) protein (167aa)
Ureidoglycolate lyase {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913}; EC=4.3.2.3 {ECO:0000256|HAMAP-Rule:MF_00616, ECO:0000256|SAAS:SAAS00181913};; Ureidoglycolatase {ECO:0000256|HAMAP-Rule:MF_00616}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
hypothetical protein Tax=Burkholderia sp. JPY347 RepID=UPI000374CAD1
allA; ureidoglycolate hydrolase
PLM3_60_coex_sep16_scaffold_24_11
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12997..14037)
DNA (1041bp) protein (347aa)
Transposase Tax=Rhizobium loti (strain MAFF303099) RepID=Q98AK6_RHILO
transposase
Transposase {ECO:0000313|EMBL:BAB52323.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
PLM3_60_coex_sep16_scaffold_24_12
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14240..15151)
DNA (912bp) protein (304aa)
chitin deacetylase Tax=Pannonibacter phragmitetus RepID=UPI000382151B
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:ADZ71147.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM3_60_coex_sep16_scaffold_24_13
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15151..16443)
DNA (1293bp) protein (431aa)
guaD; guanine deaminase (EC:3.5.4.3)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036BF5D8
Guanine deaminase {ECO:0000313|EMBL:KJR63832.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
PLM3_60_coex_sep16_scaffold_24_14
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16440..16964)
DNA (525bp) protein (175aa)
Polysaccharide deacetylase family protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZV5_POLGS
polysaccharide deacetylase
Polysaccharide deacetylase family protein {ECO:0000313|EMBL:ADZ70681.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM3_60_coex_sep16_scaffold_24_15
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16979..18160)
DNA (1182bp) protein (394aa)
Hypothetical membrane spanning protein Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IZV4_POLGS
hypothetical protein
Hypothetical membrane spanning protein {ECO:0000313|EMBL:ADZ70680.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM3_60_coex_sep16_scaffold_24_16
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18262..19329)
DNA (1068bp) protein (356aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036AE8E1
ABC transporter substrate-binding protein
Uncharacterized protein {ECO:0000313|EMBL:CCV06899.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
PLM3_60_coex_sep16_scaffold_24_17
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19422..20342)
DNA (921bp) protein (307aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036613AA
ABC transporter, permease protein {ECO:0000313|EMBL:EAV43973.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
ABC transporter permease
PLM3_60_coex_sep16_scaffold_24_18
Pseudovibrio sp. JE062, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20348..21430)
DNA (1083bp) protein (361aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003650F4B
sugar ABC transporter permease
Inner-membrane translocator {ECO:0000313|EMBL:EEA96403.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. JE062.;"
PLM3_60_coex_sep16_scaffold_24_19
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21414..23057)
DNA (1644bp) protein (548aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036C5E52
ATP-binding protein of sugar ABC transporter {ECO:0000313|EMBL:EAV43971.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata (strain ATCC 25650 / DSM 13394 / JCM 20685 / NBRC; 16684 / NCIMB 2208 / IAM 12614) (Stappia aggregata).;"
rbsA; Ribose import ATP-binding protein RbsA
PLM3_60_coex_sep16_scaffold_24_20
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23054..24040)
DNA (987bp) protein (329aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI000371556C
xanthine dehydrogenase accessory protein XdhC
Xanthine dehydrogenase accessory protein XdhC {ECO:0000313|EMBL:ADZ70675.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
PLM3_60_coex_sep16_scaffold_24_21
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24043..26382)
DNA (2340bp) protein (780aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00036A3C66
Xanthine dehydrogenase protein {ECO:0000313|EMBL:ADZ70674.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
xanthine dehydrogenase
PLM3_60_coex_sep16_scaffold_24_22
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26366..27853)
DNA (1488bp) protein (496aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI000364A067
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KFG70256.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
xdhA; xanthine dehydrogenase small subunit
PLM3_60_coex_sep16_scaffold_24_23
Pseudovibrio sp. FO-BEG1, Pseudovibrio, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27853..28203)
DNA (351bp) protein (117aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pseudovibrio.;" source="Pseudovibrio sp. (strain FO-BEG1).;"
hypothetical protein Tax=Kaistia granuli RepID=UPI00037903A8
Hydroxyisourate hydrolase
PLM3_60_coex_sep16_scaffold_24_24
Labrenzia sp. C1B10, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28320..29195)
DNA (876bp) protein (292aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00037C5CC8
Transcriptional regulator {ECO:0000313|EMBL:ERP98049.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia sp. C1B10.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_24_25
unknown

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29245..29436
DNA (192bp) protein (64aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_24_26
unknown

Not on your lists

comp(29509..29727)
DNA (219bp) protein (73aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_24_27
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29919..30338)
DNA (420bp) protein (140aa)
hypothetical protein Tax=Thalassospira lucentensis RepID=UPI0003B523C7
Protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CCQ73472.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospira.;" source="Magnetospira sp. QH-2.;"
PLM3_60_coex_sep16_scaffold_24_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30641..31264
DNA (624bp) protein (208aa)
hypothetical protein Tax=Fodinicurvata sediminis RepID=UPI0003B5A027
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS58779.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
PLM3_60_coex_sep16_scaffold_24_29
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(31331..32281)
DNA (951bp) protein (317aa)
dihydrodipicolinate synthase Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI0002628738
Dihydrodipicolinate synthase
Tax=CG_Anaero_02
PLM3_60_coex_sep16_scaffold_24_30
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32453..33268)
DNA (816bp) protein (272aa)
hypothetical protein Tax=Xanthobacteraceae RepID=UPI000364BA5F
binding-protein-dependent transport systems inner membrane component
Hydroxymethylpyrimidine ABC transporter, transmembrane component {ECO:0000313|EMBL:CEL21449.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
Displaying items 1-30 of 99 in total

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