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PLM3_60_coex_sep16_scaffold_57

Search features with annotation key words

Displaying items 1-30 of 83 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_57_1
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1310
DNA (1308bp) protein (436aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
Histidinol dehydrogenase Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THN8_TISMK
histidinol dehydrogenase
PLM3_60_coex_sep16_scaffold_57_2
Serratia plymuthica, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1324..2331
DNA (1008bp) protein (336aa)
Uncharacterized protein Tax=Serratia plymuthica A30 RepID=L0W130_SERPL
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AGP46975.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia plymuthica S13.;"
PLM3_60_coex_sep16_scaffold_57_3
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2368..2898
DNA (531bp) protein (177aa)
Gcn5-related n-acetyltransferase Tax=Methylobacterium sp. GXF4 RepID=I9CG99_9RHIZ
Gcn5-related n-acetyltransferase {ECO:0000313|EMBL:EIZ82465.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
N-acetyltransferase GCN5
PLM3_60_coex_sep16_scaffold_57_4
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2905..3393)
DNA (489bp) protein (163aa)
hypothetical protein Tax=Actinopolyspora halophila RepID=UPI0003755E77
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV79572.1}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
PLM3_60_coex_sep16_scaffold_57_5
Mesorhizobium sp. L2C084A000, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3390..4160)
DNA (771bp) protein (257aa)
UPI0003D01186 related cluster Tax=unknown RepID=UPI0003D01186
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:ESZ28541.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L2C084A000.;"
dehydrogenase
PLM3_60_coex_sep16_scaffold_57_6
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4245..5540
DNA (1296bp) protein (432aa)
Uncharacterized protein Tax=Tistrella mobilis (strain KA081020-065) RepID=I3THN3_TISMK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK52271.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
PLM3_60_coex_sep16_scaffold_57_7
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5732..7126
DNA (1395bp) protein (465aa)
Putative acetylornithine aminotransferase Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60AN8_METCA
acetylornithine aminotransferase
Putative acetylornithine aminotransferase {ECO:0000313|EMBL:AAU92883.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
PLM3_60_coex_sep16_scaffold_57_8
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..8067)
DNA (342bp) protein (114aa)
Bll2637 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89RX5_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ68123.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
PLM3_60_coex_sep16_scaffold_57_9
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8071..8556)
DNA (486bp) protein (162aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002E3EB75
crcB protein
Putative fluoride ion transporter CrcB 1 {ECO:0000255|HAMAP-Rule:MF_00454}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
PLM3_60_coex_sep16_scaffold_57_10
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8553..8945)
DNA (393bp) protein (131aa)
Putative fluoride ion transporter CrcB Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0I316_9RHIZ
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
camphor resistance protein CrcB
PLM3_60_coex_sep16_scaffold_57_11
Dactylococcopsis salina, Dactylococcopsis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

9106..9366
DNA (261bp) protein (87aa)
Acetyltransferase, N-acetylglutamate synthase Tax=Dactylococcopsis salina PCC 8305 RepID=K9YXW2_DACSA
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:AFZ50953.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Dactylococcopsis.;" source="Dactylococcopsis salina PCC 8305.;"
PLM3_60_coex_sep16_scaffold_57_12
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9543..9887)
DNA (345bp) protein (115aa)
Uncharacterized protein Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q464Y0_METBF
Uncharacterized protein {ECO:0000313|EMBL:AKB15653.1}; species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila CHTI-55.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_57_13
Streptomyces sp. HGB0020, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9921..11651)
DNA (1731bp) protein (577aa)
hypothetical protein Tax=Streptomyces sp. HmicA12 RepID=UPI0003752520
Uncharacterized protein {ECO:0000313|EMBL:EPD61444.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HGB0020.;"
serine protease
PLM3_60_coex_sep16_scaffold_57_14
Candidatus Jettenia caeni, Candidatus Jettenia, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11690..11974)
DNA (285bp) protein (95aa)
Uncharacterized protein Tax=planctomycete KSU-1 RepID=I3II96_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:GAB61441.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae.;" source="planctomycete KSU-1.;"
PLM3_60_coex_sep16_scaffold_57_15
Gluconobacter morbifer, Gluconobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12174..14495)
DNA (2322bp) protein (774aa)
ATP-dependent Clp protease ATP-binding subunit ClpA Tax=Gluconobacter morbifer G707 RepID=G6XF52_9PROT
ClpA-like protein
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EHH68810.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconobacter.;" source="Gluconobacter morbifer G707.;"
PLM3_60_coex_sep16_scaffold_57_16
unknown

Not on your lists

comp(14510..14653)
DNA (144bp) protein (48aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_57_17
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15068..16417)
DNA (1350bp) protein (450aa)
glutamate-1-semialdehyde 2,1-aminomutase (EC:5.4.3.8)
Class III aminotransferase Tax=Oceanibaculum indicum P24 RepID=K2JH41_9PROT
Class III aminotransferase {ECO:0000313|EMBL:EKE73887.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
PLM3_60_coex_sep16_scaffold_57_18
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16475..17302)
DNA (828bp) protein (276aa)
Uncharacterized protein Tax=Burkholderia sp. H160 RepID=B5WB71_9BURK
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KDP86450.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_57_19
unknown

Not on your lists

17603..18658
DNA (1056bp) protein (352aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_57_20
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18749..19558
DNA (810bp) protein (270aa)
hypothetical protein Tax=alpha proteobacterium SCGC AAA300-B11 RepID=UPI00035E2EFB
Uncharacterized protein {ECO:0000313|EMBL:EDP64087.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
phytanoyl-CoA dioxygenase family protein
PLM3_60_coex_sep16_scaffold_57_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19608..20546
DNA (939bp) protein (313aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JPT8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE77223.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_57_22
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20699..21220
DNA (522bp) protein (174aa)
Oxidoreductase Tax=Ochrobactrum RepID=U4V6V0_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EEQ92876.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
oxidoreductase molybdopterin binding domain protein
PLM3_60_coex_sep16_scaffold_57_23
alpha proteobacterium U9-1i, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21404..25183
DNA (3780bp) protein (1260aa)
hypothetical protein Tax=Methylobacterium sp. 88A RepID=UPI000382F2EC
Two-component hybrid sensor and regulator {ECO:0000313|EMBL:GAM98113.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium U9-1i.;"
PAS/PAC sensor hybrid histidine kinase
PLM3_60_coex_sep16_scaffold_57_24
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25180..25890)
DNA (711bp) protein (237aa)
Short-chain dehydrogenase/reductase SDR Tax=Pseudogulbenkiania sp. (strain NH8B) RepID=G2J3M0_PSEUL
short-chain dehydrogenase/reductase SDR
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_60_coex_sep16_scaffold_57_25
Asticcacaulis excentricus, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26191..26367
DNA (177bp) protein (59aa)
Flp/Fap pilin component Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RQ65_ASTEC
flp/fap pilin component
Flp/Fap pilin component {ECO:0000313|EMBL:ADU12122.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 /; CB 48).;"
PLM3_60_coex_sep16_scaffold_57_26
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26681..30175
DNA (3495bp) protein (1165aa)
Glutamate synthase small chain Tax=Rhodovulum sp. PH10 RepID=J6IZD8_9RHOB
Glutamate synthase small chain {ECO:0000313|EMBL:EJW10345.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
pyridine nucleotide-disulfide oxidoreductase
PLM3_60_coex_sep16_scaffold_57_27
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30184..32049)
DNA (1866bp) protein (622aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
Putative Sensory transduction histidine kinase Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F3Q1_9PROT
putative Sensory transduction histidine kinase
PLM3_60_coex_sep16_scaffold_57_28
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32766..33323
DNA (558bp) protein (186aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TX48_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP62968.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_57_29
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33323..33631
DNA (309bp) protein (103aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00037D8210
Uncharacterized protein {ECO:0000313|EMBL:EKF20942.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_57_30
RLO_Betaproteobacteria_68_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33628..34563
DNA (936bp) protein (312aa)
hypothetical protein Tax=alpha proteobacterium SCGC AB-629-F11 RepID=UPI00035E0130
metF; methylenetetrahydrofolate reductase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_19_curated
Displaying items 1-30 of 83 in total

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