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PLM3_60_coex_sep16_scaffold_66

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_66_1
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..431)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUS8_RHOCS
Uncharacterized protein {ECO:0000313|EMBL:EWY40960.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_66_2
Magnetospirillum magneticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(669..1520)
DNA (852bp) protein (284aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magneticum (strain AMB-1 / ATCC 700264).;"
Release factor glutamine methyltransferase Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W6V2_MAGSA
methylase of polypeptide chain release factor
PLM3_60_coex_sep16_scaffold_66_3
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1522..2613)
DNA (1092bp) protein (364aa)
Peptide chain release factor 1 Tax=Azospirillum brasilense Sp245 RepID=G8AT31_AZOBR
prfA; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093, ECO:0000313|EMBL:CCD00592.1}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_60_coex_sep16_scaffold_66_4
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2610..3908)
DNA (1299bp) protein (433aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
Glutamyl-tRNA reductase Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z6J7_AZOL4
gtrA; glutamyl tRNA reductase
PLM3_60_coex_sep16_scaffold_66_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3913..5160)
DNA (1248bp) protein (416aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
hisS; Histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase Tax=Oceanibaculum indicum P24 RepID=K2JAM3_9PROT
PLM3_60_coex_sep16_scaffold_66_6
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5184..6326)
DNA (1143bp) protein (381aa)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC:1.17.7.1)
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase Tax=Azospirillum amazonense Y2 RepID=G1XXW2_9PROT
PLM3_60_coex_sep16_scaffold_66_7
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6437..7906)
DNA (1470bp) protein (490aa)
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TN86_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EDP65551.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_66_8
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8102..10366)
DNA (2265bp) protein (755aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:CCG40822.1}; EC=2.7.3.9 {ECO:0000313|EMBL:CCG40822.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
Phosphoenolpyruvate-protein phosphotransferase Tax=Phaeospirillum molischianum DSM 120 RepID=H8FR34_PHAMO
signal transduction protein
PLM3_60_coex_sep16_scaffold_66_9
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10366..11430)
DNA (1065bp) protein (355aa)
2-nitropropane dioxygenase Tax=Azospirillum amazonense Y2 RepID=G1XXX3_9PROT
2-nitropropane dioxygenase {ECO:0000313|EMBL:EGY01885.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
putative 2-nitropropane dioxygenase
PLM3_60_coex_sep16_scaffold_66_10
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11435..12673)
DNA (1239bp) protein (413aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
lysC; aspartokinase II alpha subunit (aa 1->408) and beta subunit (aa 246->408) (EC:2.7.2.4)
Aspartokinase Tax=Oceanibaculum indicum P24 RepID=K2JNW6_9PROT
PLM3_60_coex_sep16_scaffold_66_11
Nitratireductor basaltis, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12829..13602
DNA (774bp) protein (258aa)
3-demethylubiquinone-9 3-methyltransferase Tax=Fodinicurvata sediminis RepID=UPI0003B55A7B
Ubiquinone biosynthesis O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472, ECO:0000256|SAAS:SAAS00063564}; 2-polyprenyl-6-hydroxyphenol methylase {ECO:0000256|HAMAP-Rule:MF_00472}; 3-demethylubiquinone 3-O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00472}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor basaltis.;"
ubiquinone biosynthesis O-methyltransferase
PLM3_60_coex_sep16_scaffold_66_12
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13701..14120)
DNA (420bp) protein (140aa)
Uncharacterized protein Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W6W2_MAGSA
Uncharacterized protein {ECO:0000313|EMBL:EWY42767.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_66_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14254..14772
DNA (519bp) protein (173aa)
S-adenosyl-L-methionine-dependent methyltransferase Tax=Oceanibaculum indicum P24 RepID=K2K230_9PROT
S-adenosyl-L-methionine-dependent methyltransferase {ECO:0000313|EMBL:EKE71550.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Tellurite resistance protein TehB
PLM3_60_coex_sep16_scaffold_66_14
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14879..15541
DNA (663bp) protein (221aa)
Peroxiredoxin Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GTC0_CUPNN
universal stress protein UspA family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_66_15
unknown

Not on your lists

15617..15958
DNA (342bp) protein (114aa)
anti-ECFsigma factor, ChrR
PLM3_60_coex_sep16_scaffold_66_16
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15968..16651)
DNA (684bp) protein (228aa)
hypothetical protein Tax=Singularimonas variicoloris RepID=UPI00036CE7DE
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABR89852.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
PLM3_60_coex_sep16_scaffold_66_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16818..17681)
DNA (864bp) protein (288aa)
Carbon-nitrogen hydrolase Tax=Caenispirillum salinarum AK4 RepID=K9H3Q0_9PROT
Amidohydrolase {ECO:0000313|EMBL:KJB94863.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative nitrilase
PLM3_60_coex_sep16_scaffold_66_18
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17678..17941)
DNA (264bp) protein (88aa)
Glutaredoxin 3 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTX3_PARL1
glutaredoxin 3
Glutaredoxin 3 {ECO:0000313|EMBL:ABS63356.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
PLM3_60_coex_sep16_scaffold_66_19
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18009..18860)
DNA (852bp) protein (284aa)
Competence protein F Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUV4_RHOCS
comF; competence protein F
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3_60_coex_sep16_scaffold_66_20
Candidatus Accumulibacter phosphatis, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18885..19529
DNA (645bp) protein (215aa)
Intradiol ring-cleavage dioxygenase Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RVK3_ACCPU
intradiol ring-cleavage dioxygenase
Intradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:ACV36476.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Accumulibacter phosphatis (strain UW-1).;"
PLM3_60_coex_sep16_scaffold_66_21
Roseovarius sp. BRH_c41, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19614..20657
DNA (1044bp) protein (348aa)
Alcohol dehydrogenase Tax=Roseovarius sp. 217 RepID=A3W5Z7_9RHOB
Alcohol dehydrogenase {ECO:0000313|EMBL:KJS45698.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. BRH_c41.;"
alcohol dehydrogenase zinc-binding domain protein
PLM3_60_coex_sep16_scaffold_66_22
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20670..21587
DNA (918bp) protein (306aa)
Methyltransferase, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IUV5_RHOCS
methyltransferase
Methyltransferase, putative {ECO:0000313|EMBL:ACJ00037.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_66_23
unknown

Not on your lists

comp(21584..22012)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_66_24
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22161..23117)
DNA (957bp) protein (319aa)
nudG; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase (EC:3.6.1.-)
hypothetical protein Tax=Elioraea tepidiphila RepID=UPI00037871F7
Mutator mutT protein {ECO:0000313|EMBL:EHM03425.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
PLM3_60_coex_sep16_scaffold_66_25
Magnetospirillum gryphiswaldense, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23164..24393)
DNA (1230bp) protein (410aa)
argJ; ornithine acetyltransferase; amino-acid acetyltransferase (EC:2.3.1.1 2.3.1.35)
N-acetylglutamate synthase Tax=Fodinicurvata sediminis RepID=UPI0003B51072
Arginine biosynthesis bifunctional protein ArgJ {ECO:0000256|HAMAP-Rule:MF_01106}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum gryphiswaldense MSR-1 v2.;"
PLM3_60_coex_sep16_scaffold_66_26
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24429..25391)
DNA (963bp) protein (321aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Putative peptidyl-prolyl isomerase (PpiC-like) Tax=Azospirillum brasilense Sp245 RepID=G8AHW7_AZOBR
peptidylprolyl isomerase
PLM3_60_coex_sep16_scaffold_66_27
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25724..28468
DNA (2745bp) protein (915aa)
Preprotein translocase secA subunit Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F6U2_9PROT
secA; Preprotein translocase secA subunit
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_60_coex_sep16_scaffold_66_28
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28484..29224)
DNA (741bp) protein (247aa)
Uncharacterized protein Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZ79_CORCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFE06420.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086; / M2) (Myxococcus coralloides).;"
PLM3_60_coex_sep16_scaffold_66_29
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29242..30198)
DNA (957bp) protein (319aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha Tax=Azospirillum brasilense Sp245 RepID=G8AI58_AZOBR
accA; acetylCoA carboxylase, alpha subunit
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_60_coex_sep16_scaffold_66_30
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30250..31230)
DNA (981bp) protein (327aa)
Citrate lyase, putative Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LT49_RUEPO
citrate lyase, putative
Citrate lyase, putative {ECO:0000313|EMBL:AAV94852.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
Displaying items 1-30 of 54 in total

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