name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_60_coex_sep16_scaffold_103_1
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..870)
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Hypothetical hydrolase/peptidase Tax=Rhizobium loti (strain MAFF303099) RepID=Q982L4_RHILO
hydrolase/peptidase
Hypothetical hydrolase/peptidase {ECO:0000313|EMBL:BAB54442.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Rhizobium loti (strain MAFF303099) (Mesorhizobium loti).;"
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PLM3_60_coex_sep16_scaffold_103_2
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1081..2448
|
Uncharacterized protein Tax=Bradyrhizobium sp. ORS 285 RepID=H0RRX9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD84706.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
|
|
PLM3_60_coex_sep16_scaffold_103_3
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2564..3319
|
Transcription regulator Tax=Rhizobium grahamii CCGE 502 RepID=S3HV25_9RHIZ
HTH-type transcriptional regulator kipR Kip operon repressor protein
HTH-type transcriptional regulator kipR Kip operon repressor protein {ECO:0000313|EMBL:CDM61332.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
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PLM3_60_coex_sep16_scaffold_103_4
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3342..4718
|
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0002E6739F
D-amino acid oxidase {ECO:0000313|EMBL:EKE71961.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter baekdonensis B30.;"
tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG Glucose-inhibited division protein A
|
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PLM3_60_coex_sep16_scaffold_103_5
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4938..6158)
|
Cytochrome P450 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YE92_9RHIZ
Cytochrome P450 {ECO:0000313|EMBL:EHH10033.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
cytochrome P450
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PLM3_60_coex_sep16_scaffold_103_6
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
comp(6220..7674)
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Amino acid permease Tax=Rhizobium sp. Pop5 RepID=K0WHS5_9RHIZ
Amino acid permease {ECO:0000313|EMBL:KDP76565.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
amino acid permease-associated region
|
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PLM3_60_coex_sep16_scaffold_103_7
Streptomyces viridochromogenes, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8007..8606
|
transcriptional regulator Tax=Nocardiopsis lucentensis RepID=UPI00034DF3D6
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:ELS58264.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces viridochromogenes Tue57.;"
|
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PLM3_60_coex_sep16_scaffold_103_8
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8684..10147
|
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase {ECO:0000313|EMBL:CEL20746.1}; EC=1.2.1.60 {ECO:0000313|EMBL:CEL20746.1};; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
Betaine-aldehyde dehydrogenase Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2BFM3_STRRD
|
|
PLM3_60_coex_sep16_scaffold_103_9
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
10140..11036
|
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LTW3_ACIC1
putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase
Putative 3,4-dihydroxyphenylacetate 2,3-dioxygenase {ECO:0000313|EMBL:AHH95451.1}; species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
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PLM3_60_coex_sep16_scaffold_103_10
Kitasatospora griseola, Kitasatospora, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
11054..11908
|
5-carboxymethyl-2-hydroxymuconate isomerase Tax=Streptomyces rapamycinicus RepID=UPI0003830C65
Kitasatospora griseola strain MF730-N6 RKJC_2, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ64787.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Kitasatospora.;" source="Kitasatospora griseola (Streptomyces griseolosporeus).;"
5-carboxymethyl-2-hydroxymuconate isomerase
|
|
PLM3_60_coex_sep16_scaffold_103_11
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria
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Not on your lists |
11931..12737
|
Acetoacetate decarboxylase Tax=Streptomyces sviceus ATCC 29083 RepID=B5HRZ4_9ACTO
Acetoacetate decarboxylase {ECO:0000313|EMBL:EDY55599.1}; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
acetoacetate decarboxylase
|
|
PLM3_60_coex_sep16_scaffold_103_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria
|
Not on your lists |
12769..14187
|
aromatic-L-amino-acid decarboxylase (EC:4.1.1.28)
Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:ABJ82176.1}; EC=4.1.1.28 {ECO:0000313|EMBL:ABJ82176.1};; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Aromatic-L-amino-acid decarboxylase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q029V0_SOLUE
|
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PLM3_60_coex_sep16_scaffold_103_13
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14203..15465
|
Cytochrome P450 family protein Tax=Roseobacter sp. SK209-2-6 RepID=A4F1N7_9RHOB
Cytochrome P450 family protein {ECO:0000313|EMBL:EBA14235.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. SK209-2-6.;"
cytochrome P450 family protein
|
|
PLM3_60_coex_sep16_scaffold_103_14
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15490..16779
|
Glutamine synthetase family protein Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JTD4_9RHOB
Glutamine synthetase family protein {ECO:0000313|EMBL:EBA03153.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacterium HTCC2150.;"
glutamine synthetase
|
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PLM3_60_coex_sep16_scaffold_103_15
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16793..17110
|
Iron-sulfur cluster-binding protein Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVD6_RUEPO
iron-sulfur cluster-binding protein
Iron-sulfur cluster-binding protein {ECO:0000313|EMBL:AAV94071.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;"
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PLM3_60_coex_sep16_scaffold_103_16
Ahrensia sp. R2A130, Ahrensia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17140..18360
|
ferredoxin reductase (EC:1.18.1.2)
Rhodocoxin reductase Tax=Ahrensia sp. R2A130 RepID=E0MJV4_9RHOB
Rhodocoxin reductase {ECO:0000313|EMBL:EFL90104.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ahrensia.;" source="Ahrensia sp. R2A130.;"
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PLM3_60_coex_sep16_scaffold_103_17
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18414..18875)
|
Uncharacterized protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HRA3_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF87150.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
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|
PLM3_60_coex_sep16_scaffold_103_trna_1
unknown
|
Not on your lists |
comp(18906..18997)
|
transferRNA SeC(p)
|
|
PLM3_60_coex_sep16_scaffold_103_18
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19024..20955)
|
Selenocysteine-specific translation elongation factor Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DW92_THIND
Translation elongation factor {ECO:0000313|EMBL:GAO35622.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
selB_[H]; Selenocysteine-specific translation elongation factor
|
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PLM3_60_coex_sep16_scaffold_103_19
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20952..21755)
|
Sel1-like repeat protein Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8HRA6_AZOC5
Sel1 repeat-containing protein
Sel1-like repeat protein {ECO:0000313|EMBL:BAF87152.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
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PLM3_60_coex_sep16_scaffold_103_20
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21759..23147)
|
L-seryl-tRNA(Sec) selenium transferase {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029253}; EC=2.9.1.1 {ECO:0000256|HAMAP-Rule:MF_00423, ECO:0000256|SAAS:SAAS00029254};; Selenocysteine synthase {ECO:0000256|HAMAP-Rule:MF_00423}; Selenocysteinyl-tRNA(Sec) synthase {ECO:0000256|HAMAP-Rule:MF_00423}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
selA_[H]; L-seryl-tRNA(Sec) selenium transferase (EC:2.9.1.1)
L-seryl-tRNA(Sec) selenium transferase Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DUE6_THIND
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PLM3_60_coex_sep16_scaffold_103_21
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23197..24120)
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Protein FdhE homolog Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JQU3_BURP8
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
formate dehydrogenase accessory protein FdhE
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PLM3_60_coex_sep16_scaffold_103_22
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24117..24755)
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Formate dehydrogenase, gamma subunit Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1C8_POLGS
formate dehydrogenase subunit gamma
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:ADZ69710.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
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PLM3_60_coex_sep16_scaffold_103_23
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24755..25654)
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fdxH; formate dehydrogenase subunit beta (EC:1.2.1.2)
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:ADP13680.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ADP13680.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
Formate dehydrogenase, beta subunit Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HT54_ACHXA
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PLM3_60_coex_sep16_scaffold_103_24
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25666..28101)
|
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EEQ93004.1}; EC=2.5.1.2 {ECO:0000313|EMBL:EEQ93004.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium LMG 3301.;"
Formate dehydrogenase, alpha subunit Tax=Ochrobactrum anthropi RepID=A6X2W7_OCHA4
formate dehydrogenase subunit alpha
|
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PLM3_60_coex_sep16_scaffold_103_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28150..28746)
|
sulfate ABC transporter substrate-binding protein Tax=Thiobacillus thioparus RepID=UPI00037384C5
sulfate ABC transporter substrate-binding protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
|
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PLM3_60_coex_sep16_scaffold_103_26
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29009..31246
|
NADH dehydrogenase-like protein / Selenide,water dikinase (EC:2.7.9.3)
NADH dehydrogenase-like protein / Selenide,water dikinase {ECO:0000313|EMBL:AGA34057.1}; EC=2.7.9.3 {ECO:0000313|EMBL:AGA34057.1};; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
NADH dehydrogenase-like protein / Selenide,water dikinase Tax=Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 / ALEN2) RepID=L0DYH2_THIND
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PLM3_60_coex_sep16_scaffold_103_27
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31235..32101)
|
hypothetical protein Tax=Leucothrix mucor RepID=UPI0003B56E65
Putative ABC-type phosphate/phosphonate transport system, periplasmic component {ECO:0000313|EMBL:EDP65085.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
|
|
PLM3_60_coex_sep16_scaffold_103_28
Synechococcus sp. PCC 6312, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
comp(32244..33449)
|
RHS repeat-associated core domain protein Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RWK0_SYNP3
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain protein {ECO:0000313|EMBL:AFY61916.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
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PLM3_60_coex_sep16_scaffold_103_29
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(33663..34088)
|
Uncharacterized protein Tax=Nitrococcus mobilis Nb-231 RepID=A4BQQ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EAR21900.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein
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