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PLM3_60_coex_sep16_scaffold_104

Search features with annotation key words

Displaying items 31-55 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_104_31
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43849..44982
DNA (1134bp) protein (378aa)
Uncharacterized protein Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFW7_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB65476.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_60_coex_sep16_scaffold_104_32
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

45035..45829
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FBA6_CONWI
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB53298.1}; Flags: Precursor;; species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 /; ID131577).;"
PLM3_60_coex_sep16_scaffold_104_33
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45831..46667
DNA (837bp) protein (279aa)
Putative ABC spermidine/putrescine transporter, inner membrane subunit Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFW5_HYPSM
spermidine/putrescine ABC transporter inner membrane protein
Putative ABC spermidine/putrescine transporter, inner membrane subunit {ECO:0000313|EMBL:CCB65474.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_60_coex_sep16_scaffold_104_34
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

46664..47443
DNA (780bp) protein (260aa)
Polyamine transport protein PotC Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFW4_HYPSM
potC; polyamine transport protein PotC
Polyamine transport protein PotC {ECO:0000313|EMBL:CCB65473.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_60_coex_sep16_scaffold_104_35
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

47634..48425
DNA (792bp) protein (264aa)
PREDICTED: glucosamine-6-phosphate isomerase-like Tax=Pantholops hodgsonii RepID=UPI0003C105DF
hypothetical protein
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3_60_coex_sep16_scaffold_104_36
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

48465..49382
DNA (918bp) protein (306aa)
ROK family protein Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH19_THET1
ROK family protein
ROK family protein {ECO:0000313|EMBL:ACZ43040.1}; species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
PLM3_60_coex_sep16_scaffold_104_37
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

49561..51726
DNA (2166bp) protein (722aa)
Putative two-component hybrid sensor and regulator Tax=Azospirillum brasilense Sp245 RepID=G8AI07_AZOBR
putative two-component hybrid sensor and regulator
Putative two-component hybrid sensor and regulator {ECO:0000313|EMBL:CCC96910.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
PLM3_60_coex_sep16_scaffold_104_38
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51734..52144
DNA (411bp) protein (137aa)
Response regulator receiver domain protein Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDL8_9CLOT
luxQ1; Autoinducer 2 sensor kinase/phosphatase
Tax=RBG_16_Deltaproteobacteria_48_10_curated
PLM3_60_coex_sep16_scaffold_104_39
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52153..53028
DNA (876bp) protein (292aa)
Response regulator receiver domain protein Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IT01_RHOP2
Uncharacterized protein {ECO:0000313|EMBL:KIZ47468.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
response regulator receiver domain-containing protein
PLM3_60_coex_sep16_scaffold_104_40
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53039..54115)
DNA (1077bp) protein (359aa)
potG; putrescine ABC transporter ATP-binding protein (EC:3.6.3.31)
Putrescine transporter, ATP-binding component of ABC transporter {ECO:0000313|EMBL:CCB65475.1}; EC=3.6.3.31 {ECO:0000313|EMBL:CCB65475.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
Putrescine transporter, ATP-binding component of ABC transporter Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JFW6_HYPSM
PLM3_60_coex_sep16_scaffold_104_41
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

54295..55194
DNA (900bp) protein (300aa)
UPI0003CF8430 related cluster Tax=unknown RepID=UPI0003CF8430
Uncharacterized protein {ECO:0000313|EMBL:ESY64057.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
Transcriptional regulator, IclR family/regucalcin
PLM3_60_coex_sep16_scaffold_104_42
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

55230..56498
DNA (1269bp) protein (423aa)
Putative Adenylate/Guanylate cyclase Tax=Azospirillum brasilense Sp245 RepID=G8AFV6_AZOBR
Adenylate cyclase {ECO:0000313|EMBL:KJB92154.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
putative Adenylate/Guanylate cyclase
PLM3_60_coex_sep16_scaffold_104_43
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(56499..57746)
DNA (1248bp) protein (416aa)
D-amino acid dehydrogenase small subunit Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=DADA_MAGSA
glycine/D-amino acid oxidase
Tax=RBG_16_Gamma2_65_34_curated
PLM3_60_coex_sep16_scaffold_104_44
Burkholderia andropogonis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(57758..58237)
DNA (480bp) protein (160aa)
endoribonuclease L-PSP Tax=Pusillimonas noertemannii RepID=UPI0002D99340
Uncharacterized protein {ECO:0000313|EMBL:KKB63763.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia andropogonis.;"
endoribonuclease L-PSP
PLM3_60_coex_sep16_scaffold_104_45
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

58412..59338
DNA (927bp) protein (309aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI00031CC881
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJB04413.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
family 3 extracellular solute-binding protein
PLM3_60_coex_sep16_scaffold_104_46
RBG_16_Chloroflexi_64_32_curated, Chloroflexi, Bacteria

Not on your lists

59414..60181
DNA (768bp) protein (256aa)
Glutamine abc transporter, ATP-binding protein Tax=Pseudomonas syringae Cit 7 RepID=F3H1M1_PSESX
glutamine abc transporter ATP-binding protein
Tax=RBG_16_Chloroflexi_64_32_curated
PLM3_60_coex_sep16_scaffold_104_47
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

60184..60849
DNA (666bp) protein (222aa)
hypothetical protein Tax=Pseudaminobacter salicylatoxidans RepID=UPI00036EEE9D
glutamine-binding periplasmic protein of glutamine ABC transporter
Glutamine-binding periplasmic protein of glutamine ABC transporter {ECO:0000313|EMBL:AIE85360.1}; species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
PLM3_60_coex_sep16_scaffold_104_48
Pseudomonas cichorii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

60868..61548
DNA (681bp) protein (227aa)
hypothetical protein Tax=Pseudomonas veronii RepID=UPI000381D61B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF66529.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cichorii JBC1.;"
PLM3_60_coex_sep16_scaffold_104_49
RLO_PLX_64_10, Bacteria

Not on your lists

61572..62756
DNA (1185bp) protein (395aa)
Mandelate racemase/muconate lactonizing protein Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PVP4_STANL
mandelate racemase/muconate lactonizing protein
Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
PLM3_60_coex_sep16_scaffold_104_50
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62760..63548)
DNA (789bp) protein (263aa)
Putative hydratase Tax=alpha proteobacterium BAL199 RepID=A8TT29_9PROT
Hydratase {ECO:0000313|EMBL:GAN77433.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
fumarylacetoacetate (FAA) hydrolase
PLM3_60_coex_sep16_scaffold_104_51
unknown

Not on your lists

63833..64174
DNA (342bp) protein (114aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_104_52
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

64268..65080
DNA (813bp) protein (271aa)
Putative uncharacterized protein Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YC94_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH10659.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Hypothetical protein
PLM3_60_coex_sep16_scaffold_104_53
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

65359..66405
DNA (1047bp) protein (349aa)
Uncharacterized protein Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ESM0_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06222.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiaticus (strain 5a2).;"
PLM3_60_coex_sep16_scaffold_104_54
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66412..66687)
DNA (276bp) protein (92aa)
Uncharacterized protein Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A390_STAND
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH87808.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
PLM3_60_coex_sep16_scaffold_104_55
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

66772..69105
DNA (2334bp) protein (778aa)
Copper-transporting P-type ATPase {ECO:0000313|EMBL:KFC75675.1}; EC=3.6.3.4 {ECO:0000313|EMBL:KFC75675.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
Copper-transporting P-type ATPase Tax=Roseomonas sp. B5 RepID=UPI0003002748
cation translocating P-type ATPase
Displaying items 31-55 of 55 in total

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