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PLM3_60_coex_sep16_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_181_1
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226..2541)
DNA (2316bp) protein (772aa)
TRAP transporter, 4TM/12TM fusion protein Tax=Microvirga sp. WSM3557 RepID=I4YTK7_9RHIZ
TRAP transporter, 4TM/12TM fusion protein {ECO:0000313|EMBL:EIM27299.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
TRAP transporter
PLM3_60_coex_sep16_scaffold_181_2
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2564..3520)
DNA (957bp) protein (319aa)
TRAP transporter solute receptor Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8IJL1_AZOC5
TRAP transporter solute receptor
TRAP transporter solute receptor {ECO:0000313|EMBL:BAF86321.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
PLM3_60_coex_sep16_scaffold_181_3
Xanthomonas citri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4002..6581
DNA (2580bp) protein (860aa)
Sensor histidine kinase Tax=Xanthomonas axonopodis pv. citri (strain 306) RepID=Q8PGY9_XANAC
PAS/PAC sensor hybrid histidine kinase
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:AJZ41284.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas citri subsp. citri.;"
PLM3_60_coex_sep16_scaffold_181_4
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

6550..7614
DNA (1065bp) protein (355aa)
adenylate/guanylate cyclase bin=bin7_NC10_sister species=Desulfotignum phosphitoxidans genus=Desulfotignum taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
adenylate/guanylate cyclase
Tax=CSP1_6_Rokubacteria
PLM3_60_coex_sep16_scaffold_181_5
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7680..9029
DNA (1350bp) protein (450aa)
Transcriptional regulator of C4-dicarboxylate transport Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZBR9_AZOL4
Fis family transcriptional regulator {ECO:0000313|EMBL:KJR63239.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
dctD1; Transcriptional regulator of C4-dicarboxylate transport
PLM3_60_coex_sep16_scaffold_181_6
unknown

Not on your lists

comp(9039..10007)
DNA (969bp) protein (323aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_181_7
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(10021..11760)
DNA (1740bp) protein (580aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PAJ7_9DELT
von Willebrand factor type A
Tax=RBG_16_Chloroflexi_63_12_curated
PLM3_60_coex_sep16_scaffold_181_8
Arenimonas composti, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11753..12562)
DNA (810bp) protein (270aa)
Uncharacterized protein {ECO:0000313|EMBL:KFN50838.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas composti TR7-09 = DSM 18010.;"
Putative uncharacterized protein bin=GWC2_ACD39_50_8 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_ACD39_50_8 organism_group=ACD39
PLM3_60_coex_sep16_scaffold_181_9
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13185..14414)
DNA (1230bp) protein (410aa)
Arabinose efflux permease family protein Tax=Rhizobium sp. CF122 RepID=J2IPG1_9RHIZ
Arabinose efflux permease family protein {ECO:0000313|EMBL:EJL57835.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
major facilitator superfamily protein
PLM3_60_coex_sep16_scaffold_181_10
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14878..15108
DNA (231bp) protein (77aa)
transcriptional regulator Tax=Bradyrhizobium elkanii RepID=UPI0002E059F5
transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:BAL11918.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_181_11
unknown

Not on your lists

comp(15249..15455)
DNA (207bp) protein (69aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_181_12
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15499..15981
DNA (483bp) protein (161aa)
Bll0881 protein Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89W12_BRADU
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
PLM3_60_coex_sep16_scaffold_181_trna_1
unknown

Not on your lists

comp(16257..16340)
DNA (84bp)
transferRNA Leu
PLM3_60_coex_sep16_scaffold_181_13
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16502..17083
DNA (582bp) protein (194aa)
DedA family protein Tax=Rhodomicrobium vannielii (strain ATCC 17100 / ATH 3.1.1 / DSM 162 / LMG 4299) RepID=E3I6C0_RHOVT
DedA family protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_181_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17135..17632
DNA (498bp) protein (166aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI000363BAB1
Dihydroneopterin aldolase {ECO:0000313|EMBL:KJB95213.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
disulfide bond formation protein
PLM3_60_coex_sep16_scaffold_181_15
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17629..18180
DNA (552bp) protein (184aa)
2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; EC=1.14.13.- {ECO:0000256|HAMAP-Rule:MF_01658};; 5-demethoxyubiquinone hydroxylase {ECO:0000256|HAMAP-Rule:MF_01658}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Ubiquinone biosynthesis protein COQ7 Tax=Oceanibaculum indicum P24 RepID=K2JHT4_9PROT
putative Ubiquinone biosynthesis protein COQ7 homolog
PLM3_60_coex_sep16_scaffold_181_16
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18177..18740)
DNA (564bp) protein (188aa)
Putative HNH endonuclease Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z5Y5_AZOL4
MFS transporter {ECO:0000313|EMBL:EWY39616.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
putative HNH endonuclease
PLM3_60_coex_sep16_scaffold_181_17
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18881..19570)
DNA (690bp) protein (230aa)
putative Uncharacterized hydrolase RBE_1307 (EC:3.1.-.-)
Phospholipase/carboxylesterase Tax=Oceanibaculum indicum P24 RepID=K2JE60_9PROT
Phospholipase {ECO:0000313|EMBL:KJB95210.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
PLM3_60_coex_sep16_scaffold_181_18
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19751..20614
DNA (864bp) protein (288aa)
gltX; glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamyl-tRNA synthetase GltX Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IYT0_RHOCS
Glutamyl-tRNA synthetase {ECO:0000313|EMBL:EWY39614.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
PLM3_60_coex_sep16_scaffold_181_19
Rhodobacter sp. CACIA14H1, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20647..21357
DNA (711bp) protein (237aa)
Membrane protein Tax=Rhodobacter sp. CACIA14H1 RepID=V7EKS7_9RHOB
Membrane protein {ECO:0000313|EMBL:ESW61613.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sp. CACIA14H1.;"
integral membrane protein TerC
PLM3_60_coex_sep16_scaffold_181_20
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21379..22239)
DNA (861bp) protein (287aa)
NTP pyrophosphohydrolase including oxidative damage repair enzyme Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W080_MAGSA
DNA mismatch repair protein MutT {ECO:0000313|EMBL:KJB95208.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
PLM3_60_coex_sep16_scaffold_181_21
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22244..23110)
DNA (867bp) protein (289aa)
MutT/nudix family protein Tax=Rhodospirillum photometricum DSM 122 RepID=H6SNV8_RHOPH
MutT/nudix family protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
PLM3_60_coex_sep16_scaffold_181_22
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23253..23948
DNA (696bp) protein (232aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00037E507D
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
PLM3_60_coex_sep16_scaffold_181_23
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24028..24633
DNA (606bp) protein (202aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00035D1973
Uncharacterized protein {ECO:0000313|EMBL:EDP65831.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_181_24
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24756..25286
DNA (531bp) protein (177aa)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI00035D1973
Uncharacterized protein {ECO:0000313|EMBL:EDP63636.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_181_25
Thalassospira profundimaris, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25374..25970
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Thalassospira profundimaris WP0211 RepID=K2KX39_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKF10269.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_181_26
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26038..26598
DNA (561bp) protein (187aa)
hypothetical protein Tax=Roseomonas sp. B5 RepID=UPI0003740072
Uncharacterized protein {ECO:0000313|EMBL:ESQ83451.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis sp. AC466.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_181_27
Sinorhizobium americanum, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26723..27016
DNA (294bp) protein (98aa)
GYD family protein Tax=Rhizobium sp. (strain BR816) RepID=UPI00037A0D44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KEC77875.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium americanum CCGM7.;"
PLM3_60_coex_sep16_scaffold_181_28
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27111..27719
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Emiliania huxleyi CCMP1516 RepID=R1EWN2_EMIHU
Uncharacterized protein {ECO:0000313|EMBL:ETX01419.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
isochorismatase hydrolase
PLM3_60_coex_sep16_scaffold_181_29
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27716..28144)
DNA (429bp) protein (143aa)
Uncharacterized protein Tax=Sphingobium sp. AP49 RepID=J2CZA6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJK82559.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hypothetical protein
Displaying items 1-30 of 39 in total

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