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PLM3_60_coex_sep16_scaffold_244

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_244_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(53..1318)
DNA (1266bp) protein (422aa)
UPI0003CF5114 related cluster Tax=unknown RepID=UPI0003CF5114
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:ESW87542.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
amino acid ABC transporter substrate-binding protein
PLM3_60_coex_sep16_scaffold_244_2
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1368..1787)
DNA (420bp) protein (140aa)
UPI0003CF5F1D related cluster Tax=unknown RepID=UPI0003CF5F1D
Uncharacterized protein {ECO:0000313|EMBL:ESW87543.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_244_3
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1787..2845)
DNA (1059bp) protein (353aa)
Aldo/keto reductase Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL8_9RHIZ
Aldo/keto reductase {ECO:0000313|EMBL:EHK59078.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_244_4
Mesorhizobium loti, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2851..3201)
DNA (351bp) protein (117aa)
Mlr7179 protein Tax=Rhizobium loti (strain MAFF303099) RepID=Q986W7_RHILO
hypothetical protein
TIGR04076 family protein {ECO:0000313|EMBL:ETA71676.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium loti R7A.;"
PLM3_60_coex_sep16_scaffold_244_5
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3313..4071
DNA (759bp) protein (253aa)
ABC transporter, ATP-binding protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJL5_9RHIZ
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHK59075.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
ABC-type branched-chain amino acid transport systems, ATPase component
PLM3_60_coex_sep16_scaffold_244_6
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4068..4805
DNA (738bp) protein (246aa)
Candidate ABC type branched chain amino acid transport system, ATP-binding component Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XXN7_RAMTT
branched chain amino acid ABC transporter ATP-binding protein
Candidate ABC type branched chain amino acid transport system, ATP-binding component {ECO:0000313|EMBL:AEG91840.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
PLM3_60_coex_sep16_scaffold_244_7
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4802..5710
DNA (909bp) protein (303aa)
UPI0003CE60C1 related cluster Tax=unknown RepID=UPI0003CE60C1
ABC transporter permease {ECO:0000313|EMBL:ESW87550.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
branched-chain amino acid ABC-type transport system, permease component
PLM3_60_coex_sep16_scaffold_244_8
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5707..6654
DNA (948bp) protein (316aa)
ABC transporter permease Tax=Pseudaminobacter salicylatoxidans RepID=UPI0002D71C19
Inner-membrane translocator {ECO:0000313|EMBL:EHK59072.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
inner-membrane translocator
PLM3_60_coex_sep16_scaffold_244_9
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6932..7336)
DNA (405bp) protein (135aa)
Uncharacterized protein Tax=Rhodanobacter fulvus Jip2 RepID=I4VL57_9GAMM
Aldehyde-activating protein {ECO:0000313|EMBL:KGM35470.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
aldehyde-activating protein
PLM3_60_coex_sep16_scaffold_244_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7436..7918)
DNA (483bp) protein (161aa)
Phage tail region protein Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WPC4_9BURK
Phage tail region protein {ECO:0000313|EMBL:EHR71176.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
PLM3_60_coex_sep16_scaffold_244_11
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7915..8349)
DNA (435bp) protein (145aa)
hypothetical protein Tax=alpha proteobacterium LLX12A RepID=UPI00037A843E
Phage tail protein {ECO:0000313|EMBL:ELX08648.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_244_12
Mesorhizobium sp. L48C026A00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8550..10274
DNA (1725bp) protein (575aa)
adenylate cyclase (EC:4.6.1.1)
UPI0003D014C4 related cluster Tax=unknown RepID=UPI0003D014C4
Adenylate cyclase {ECO:0000313|EMBL:ESZ18251.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. L48C026A00.;"
PLM3_60_coex_sep16_scaffold_244_13
Mesorhizobium sp. LNHC221B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10295..12280)
DNA (1986bp) protein (662aa)
UPI0003CEFE85 related cluster Tax=unknown RepID=UPI0003CEFE85
Uncharacterized protein {ECO:0000313|EMBL:ESY76544.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC221B00.;"
putative integral membrane protein
PLM3_60_coex_sep16_scaffold_244_14
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(12606..13244)
DNA (639bp) protein (213aa)
Lysine exporter protein (LYSE/YGGA) Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TYI8_9CHLR
Lysine exporter protein (LYSE/YGGA) {ECO:0000313|EMBL:EFH83268.1}; species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racemifer DSM 44963.;"
amino acid transporter
PLM3_60_coex_sep16_scaffold_244_15
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13442..14077)
DNA (636bp) protein (212aa)
PAS domain S-box Tax=Bradyrhizobium sp. YR681 RepID=J3I1D1_9BRAD
PAS domain S-box {ECO:0000313|EMBL:EJN11978.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
PAS sensor Signal Tranduction Histidine Kinase
PLM3_60_coex_sep16_scaffold_244_16
Pantoea sp. PSNIH1, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14113..14442
DNA (330bp) protein (110aa)
Uncharacterized protein Tax=Burkholderia graminis C4D1M RepID=B1G1U1_9BURK
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AIX51486.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH1.;"
PLM3_60_coex_sep16_scaffold_244_17
Xanthomonas albilineans, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15185..15820
DNA (636bp) protein (212aa)
Putative l-sorbosone dehydrogenase protein Tax=Xanthomonas albilineans (strain GPE PC73 / CFBP 7063) RepID=D2UG94_XANAP
L-sorbosone dehydrogenase precursor
Putative l-sorbosone dehydrogenase protein {ECO:0000313|EMBL:CBA17405.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas albilineans (strain GPE PC73 / CFBP 7063).;"
PLM3_60_coex_sep16_scaffold_244_18
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15854..16153
DNA (300bp) protein (100aa)
Uncharacterized protein Tax=Afipia broomeae ATCC 49717 RepID=K8PIY8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41506.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_244_19
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16237..16581)
DNA (345bp) protein (115aa)
Glutathione-dependent formaldehyde-activating GFA Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HE75_ANADF
glutathione-dependent formaldehyde-activating protein
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
PLM3_60_coex_sep16_scaffold_244_20
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16669..17241)
DNA (573bp) protein (191aa)
hypothetical protein Tax=Bradyrhizobium elkanii RepID=UPI000374FF83
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL09771.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_244_21
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

17412..18308
DNA (897bp) protein (299aa)
gluconolactonase (EC:3.1.1.17)
Gluconolactonase bin=GWF2_Methylomirabilis_70_14 species=Mesorhizobium ciceri genus=Mesorhizobium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Tax=GWA2_Rokubacteria_70_23_curated
PLM3_60_coex_sep16_scaffold_244_22
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18451..19431
DNA (981bp) protein (327aa)
Probable 2-nitropropane dioxygenase Tax=Oceanibulbus indolifex HEL-45 RepID=A9DXJ3_9RHOB
Probable 2-nitropropane dioxygenase {ECO:0000313|EMBL:EDQ06208.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanibulbus.;" source="Oceanibulbus indolifex HEL-45.;"
2-nitropropane dioxygenase NPD
PLM3_60_coex_sep16_scaffold_244_23
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19428..20267
DNA (840bp) protein (280aa)
Uncharacterized protein Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GYS8_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:ERF82622.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
putative transcriptional regulator, XRE family
PLM3_60_coex_sep16_scaffold_244_24
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20376..21317
DNA (942bp) protein (314aa)
Uncharacterized protein Tax=Oceanibaculum indicum P24 RepID=K2JU43_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE73919.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
permease
PLM3_60_coex_sep16_scaffold_244_25
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21314..21487
DNA (174bp) protein (58aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHL73692.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
PLM3_60_coex_sep16_scaffold_244_26
unknown

Not on your lists

22197..22649
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_244_27
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22666..24435)
DNA (1770bp) protein (590aa)
regulatory protein Tax=Rhizobium mongolense RepID=UPI0003B7280C
Uncharacterized protein {ECO:0000313|EMBL:KJC53818.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
regulatory protein
PLM3_60_coex_sep16_scaffold_244_28
Morococcus cerebrosus, Morococcus, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24668..25894
DNA (1227bp) protein (409aa)
TPR repeat protein {ECO:0000313|EMBL:KIC08501.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KIC08501.1};; species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Morococcus.;" source="Morococcus cerebrosus.;"
hypothetical protein Tax=Nitrospina sp. AB-629-B18 RepID=UPI0003809CE0
Sel1 domain-containing protein
PLM3_60_coex_sep16_scaffold_244_29
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26031..26699)
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Ralstonia pickettii DTP0602 RepID=U3QX67_RALPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGW95514.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
PLM3_60_coex_sep16_scaffold_244_30
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26845..28617)
DNA (1773bp) protein (591aa)
regulatory protein Tax=Rhizobium mongolense RepID=UPI0003B7280C
Uncharacterized protein {ECO:0000313|EMBL:KJC53818.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
regulatory protein
Displaying items 1-30 of 35 in total

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