name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
PLM3_60_coex_sep16_scaffold_275_1
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1..138)
|
Integrase family protein Tax=Methylobacterium extorquens DSM 13060 RepID=H1KJN6_METEX
Integrase family protein {ECO:0000313|EMBL:EHP92281.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens DSM 13060.;"
integrase family protein
|
|
PLM3_60_coex_sep16_scaffold_275_2
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
219..845
|
Large-conductance mechanosensitive channel Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=MSCL_METSB
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
mscL; large-conductance mechanosensitive channel
|
|
PLM3_60_coex_sep16_scaffold_275_3
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1075..2982
|
Sporulation protein Tax=Sphingobium lactosutens DS20 RepID=T0HJ49_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
PLM3_60_coex_sep16_scaffold_275_4
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3079..3852)
|
Short-chain dehydrogenase/reductase SDR Tax=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) RepID=B1M654_METRJ
Short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AIQ87818.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
|
|
PLM3_60_coex_sep16_scaffold_275_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(3862..5502)
|
Acyl-CoA synthetase bin=GWA2_Methylomirabilis_73_35 species=Oceanibaculum indicum genus=Oceanibaculum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
acyl-CoA synthetase
Tax=GWA2_Rokubacteria_73_35_curated
|
|
PLM3_60_coex_sep16_scaffold_275_6
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5614..6273
|
Polyketide biosynthesis dithiol-disulfide isomerase Tax=Oceanibaculum indicum P24 RepID=K2KJZ2_9PROT
Polyketide biosynthesis dithiol-disulfide isomerase {ECO:0000313|EMBL:EKE77650.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
polyketide biosynthesis dithiol-disulfide isomerase
|
|
PLM3_60_coex_sep16_scaffold_275_7
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6289..9762)
|
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Transcription-repair-coupling factor Tax=Oceanibaculum indicum P24 RepID=K2JK31_9PROT
transcription-repair coupling factor
|
|
PLM3_60_coex_sep16_scaffold_275_8
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9759..10040)
|
Uncharacterized protein Tax=Azospirillum sp. (strain B510) RepID=D3NTY0_AZOS1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAI71859.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
|
|
PLM3_60_coex_sep16_scaffold_275_9
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10110..12191
|
ATP-dependent DNA helicase RecG Tax=Magnetospirillum sp. SO-1 RepID=M2Z904_9PROT
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EME70840.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
|
|
PLM3_60_coex_sep16_scaffold_275_10
Rhodospirillaceae bacterium BRH_c57, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12188..12931)
|
Uncharacterized protein Tax=alpha proteobacterium BAL199 RepID=A8TKX8_9PROT
Membrane protein {ECO:0000313|EMBL:KJS42673.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae.;" source="Rhodospirillaceae bacterium BRH_c57.;"
Conserved protein of unknown function
|
|
PLM3_60_coex_sep16_scaffold_275_11
unknown
|
Not on your lists |
comp(13145..13672)
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_12
unknown
|
Not on your lists |
comp(13920..14408)
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_13
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria
|
Not on your lists |
comp(14433..14687)
|
Transglycosylase-associated protein bin=GWF2_Ignavibacteria_35_20 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
hypothetical protein
Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
|
|
PLM3_60_coex_sep16_scaffold_275_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14774..16576)
|
Uncharacterized protein Tax=Azospirillum brasilense Sp245 RepID=G8AJ41_AZOBR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJB92963.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
|
|
PLM3_60_coex_sep16_scaffold_275_15
unknown
|
Not on your lists |
16920..17483
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_16
unknown
|
Not on your lists |
18114..18329
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_17
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18709..20940
|
PAS/PAC domain protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PJ99_9DELT
BaeS protein {ECO:0000313|EMBL:BAQ47628.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
Multi-sensor hybrid histidine kinase
|
|
PLM3_60_coex_sep16_scaffold_275_18
unknown
|
Not on your lists |
comp(20992..21570)
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_19
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22101..22364
|
Uncharacterized protein Tax=Lutibaculum baratangense AMV1 RepID=V4RIY3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ESR26046.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;"
hypothetical protein
|
|
PLM3_60_coex_sep16_scaffold_275_20
unknown
|
Not on your lists |
comp(22884..22991)
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_21
unknown
|
Not on your lists |
comp(23350..23523)
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_22
unknown
|
Not on your lists |
23669..23830
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_23
unknown
|
Not on your lists |
23864..24055
|
This feature has no annotations |
|
PLM3_60_coex_sep16_scaffold_275_trna_1
unknown
|
Not on your lists |
comp(24169..24240)
|
transferRNA Lys
|
|
PLM3_60_coex_sep16_scaffold_275_24
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24448..25005)
|
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
Phosphopantetheine adenylyltransferase Tax=Azospirillum brasilense Sp245 RepID=G8AQN9_AZOBR
phosphopantetheine adenylyltransferase
|
|
PLM3_60_coex_sep16_scaffold_275_25
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24998..27787)
|
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897, ECO:0000313|EMBL:KJB93524.1}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
DNA gyrase subunit A Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z4U7_AZOL4
gyrA; DNA gyrase subunit A
|
|
PLM3_60_coex_sep16_scaffold_275_26
BJP_IG2158_Rhodobacterales_69_12, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28035..29159)
|
hypothetical protein Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00031A4E97
potD; spermidine/putrescine ABC transporter
Tax=BJP_IG2158_Rhodobacterales_69_12
|
|
PLM3_60_coex_sep16_scaffold_275_27
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29156..29650)
|
Single-stranded DNA-binding protein Tax=Oceanibaculum indicum P24 RepID=K2JQQ4_9PROT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
single-strand DNA binding protein
|
|
PLM3_60_coex_sep16_scaffold_275_28
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29851..32754
|
UvrABC system protein A Tax=Oceanibaculum indicum P24 RepID=K2K3W0_9PROT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
uvrA; excinuclease ABC, subunit A
|
|
PLM3_60_coex_sep16_scaffold_275_29
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria
|
Not on your lists |
32938..33237
|
Predicted regulator of plasmid copy number Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKP2_9BACT
hypothetical protein
Predicted regulator of plasmid copy number {ECO:0000313|EMBL:CBE67689.1}; species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
|