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PLM3_60_coex_sep16_scaffold_324

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_324_1
Mesorhizobium sp. LSHC420B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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219..1952
DNA (1734bp) protein (578aa)
cya-3; adenylate cyclase 3 (EC:4.6.1.1)
Adenylate cyclase Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FGJ8_9RHIZ
Adenylate cyclase {ECO:0000313|EMBL:ESX74160.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;"
PLM3_60_coex_sep16_scaffold_324_2
unknown

Not on your lists

comp(3253..3492)
DNA (240bp) protein (80aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_3
unknown

Not on your lists

comp(3536..3790)
DNA (255bp) protein (85aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_4
unknown

Not on your lists

4380..4610
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_5
unknown

Not on your lists

4702..4911
DNA (210bp) protein (70aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_6
unknown

Not on your lists

comp(5267..5518)
DNA (252bp) protein (84aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_7
unknown

Not on your lists

comp(5670..6014)
DNA (345bp) protein (115aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6347..7015)
DNA (669bp) protein (223aa)
Uncharacterized protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFX4_BRAJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL08338.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
PLM3_60_coex_sep16_scaffold_324_9
unknown

Not on your lists

7465..7659
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_10
unknown

Not on your lists

comp(7656..8009)
DNA (354bp) protein (118aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_11
unknown

Not on your lists

comp(8668..9096)
DNA (429bp) protein (143aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_12
unknown

Not on your lists

comp(9134..9703)
DNA (570bp) protein (190aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_13
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10113..10841)
DNA (729bp) protein (243aa)
Uncharacterized protein Tax=Pseudomonas alcaligenes OT 69 RepID=U3HJW4_PSEAC
Uncharacterized protein {ECO:0000313|EMBL:EQM71941.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligenes OT 69.;"
putative two-component response regulator
PLM3_60_coex_sep16_scaffold_324_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10919..14941)
DNA (4023bp) protein (1341aa)
Histidine kinase {ECO:0000313|EMBL:KJB92302.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
Histidine kinase bin=GWA2_Methylomirabilis_73_35 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
histidine kinase
PLM3_60_coex_sep16_scaffold_324_15
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15268..15474
DNA (207bp) protein (69aa)
Uncharacterized conserved small protein Tax=Pseudomonas stutzeri RCH2 RepID=L0GJK3_PSEST
hypothetical protein
Uncharacterized conserved small protein {ECO:0000313|EMBL:AGA86181.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri RCH2.;"
PLM3_60_coex_sep16_scaffold_324_16
unknown

Not on your lists

15489..15689
DNA (201bp) protein (67aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_17
unknown

Not on your lists

15686..16393
DNA (708bp) protein (236aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_18
unknown

Not on your lists

16473..16736
DNA (264bp) protein (88aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_19
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16759..17355
DNA (597bp) protein (199aa)
Uncharacterized protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z2N7_AZOL4
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:CBS87664.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM3_60_coex_sep16_scaffold_324_20
Sphingomonas sp. NS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17598..19892)
DNA (2295bp) protein (765aa)
Nitric-oxide reductase, quinol-dependent {ECO:0000313|EMBL:AJW29235.1}; EC=1.7.2.5 {ECO:0000313|EMBL:AJW29235.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;"
Nitric-oxide reductase subunit B Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RR47_ALLVD
nitric-oxide reductase subunit B
PLM3_60_coex_sep16_scaffold_324_21
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20467..21480
DNA (1014bp) protein (338aa)
Putative AraC-family transcriptional regulator Tax=Sorangium cellulosum (strain So ce56) RepID=A9G5B2_SORC5
AraC family transcriptional regulator
Putative AraC-family transcriptional regulator {ECO:0000313|EMBL:CAN99004.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
PLM3_60_coex_sep16_scaffold_324_22
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21464..22276
DNA (813bp) protein (271aa)
Type 11 methyltransferase Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EZQ1_9NOCA
type 11 methyltransferase
Type 11 methyltransferase {ECO:0000313|EMBL:AFU02584.1}; species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis ATCC 700358.;"
PLM3_60_coex_sep16_scaffold_324_23
Blastopirellula marina, Blastopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22331..22891
DNA (561bp) protein (187aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding Tax=Blastopirellula marina DSM 3645 RepID=A3ZRW1_9PLAN
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding {ECO:0000313|EMBL:EAQ80880.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
pyridoxamine 5'-phosphate oxidase
PLM3_60_coex_sep16_scaffold_324_24
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22851..23105
DNA (255bp) protein (85aa)
Amidohydrolase Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HWD9_PARL1
Amidohydrolase {ECO:0000313|EMBL:GAK46080.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
amidohydrolase
PLM3_60_coex_sep16_scaffold_324_25
unknown

Not on your lists

comp(23390..23620)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_26
unknown

Not on your lists

23784..24755
DNA (972bp) protein (324aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_27
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24852..25076
DNA (225bp) protein (75aa)
Uncharacterized protein Tax=Sphingobium sp. HDIP04 RepID=T0HS16_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB00324.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_324_28
unknown

Not on your lists

25076..25180
DNA (105bp) protein (35aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_324_29
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25684..26778
DNA (1095bp) protein (365aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00037E1D35
Uncharacterized protein {ECO:0000313|EMBL:EAQ33925.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
site-specific recombinase XerD-like protein
PLM3_60_coex_sep16_scaffold_324_30
Candidatus Pelagibacter sp. HTCC7211, Candidatus Pelagibacter, Pelagibacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27141..28358
DNA (1218bp) protein (406aa)
Rieske 2Fe-2S family protein Tax=Candidatus Pelagibacter sp. HTCC7211 RepID=B6BQ91_9PROT
Rieske 2Fe-2S family protein {ECO:0000313|EMBL:EDZ60456.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Pelagibacterales; Pelagibacteraceae; Candidatus Pelagibacter.;" source="Candidatus Pelagibacter sp. HTCC7211.;"
dioxygenase subunit alpha
Displaying items 1-30 of 63 in total

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