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PLM3_60_coex_sep16_scaffold_404

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_404_1
Synechocystis sp. PCC 6714, Synechocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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2..3001
DNA (3000bp) protein (1000aa)
Putative Ig domain family Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXL7_TISMK
Putative Ig domain family
T1SS secreted agglutinin (RTX) {ECO:0000313|EMBL:AIE72958.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechocystis.;" source="Synechocystis sp. (strain PCC 6714) (Aphanocapsa sp. (strain PCC; 6714)).;"
PLM3_60_coex_sep16_scaffold_404_2
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3220..3774
DNA (555bp) protein (185aa)
Uncharacterized protein Tax=Thauera sp. 27 RepID=N6XZ46_9RHOO
hypothetical protein
Tax=RBG_16_Gamma2_65_34_curated
PLM3_60_coex_sep16_scaffold_404_3
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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3771..5255
DNA (1485bp) protein (495aa)
Integral membrane sensor hybrid histidine kinase Tax=Desulfococcus multivorans DSM 2059 RepID=S7V0K4_DESML
multi-sensor hybrid histidine kinase
Tax=BJP_IG2102_Bacteroidetes_40_9
PLM3_60_coex_sep16_scaffold_404_4
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5369..5857
DNA (489bp) protein (163aa)
Transcriptional regulator Tax=Azospirillum sp. (strain B510) RepID=D3P4Z0_AZOS1
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:KJR64551.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_404_5
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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5866..7320
DNA (1455bp) protein (485aa)
Cysteine desulfurase activator complex subunit SufB Tax=Oceanibaculum indicum P24 RepID=K2JRQ2_9PROT
Cysteine desulfarase {ECO:0000313|EMBL:KJB92343.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
sufB; cysteine desulfurase activator complex subunit SufB
PLM3_60_coex_sep16_scaffold_404_6
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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7348..8103
DNA (756bp) protein (252aa)
ABC transporter involved in Fe-S cluster assembly SufC, ATP-binding protein Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZEF3_AZOL4
sufC; ABC transporter involved in Fe-S cluster assembly SufC, ATP-binding protein
ABC transporter involved in Fe-S cluster assembly SufC, ATP-binding protein {ECO:0000313|EMBL:CBS90093.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;"
PLM3_60_coex_sep16_scaffold_404_7
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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8115..9446
DNA (1332bp) protein (444aa)
ABC transporter involved in Fe-S cluster assembly protein SufD Tax=Oceanibaculum indicum P24 RepID=K2J513_9PROT
FeS assembly protein SufD {ECO:0000313|EMBL:EWY37898.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
sufD; FeS assembly protein SufD
PLM3_60_coex_sep16_scaffold_404_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

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9443..10714
DNA (1272bp) protein (424aa)
cysteine desulfurase (EC:2.8.1.7)
hypothetical protein Tax=Kiloniella laminariae RepID=UPI0003642A0E
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_coex_sep16_scaffold_404_9
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10714..11181
DNA (468bp) protein (156aa)
SUF system FeS assembly protein, NifU family Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BWZ1_NITHN
SUF system FeS assembly protein, NifU family
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ADE13872.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3_60_coex_sep16_scaffold_404_10
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11178..11573
DNA (396bp) protein (132aa)
Uncharacterized protein Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JS42_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ15110.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
FeS assembly SUF system protein
PLM3_60_coex_sep16_scaffold_404_11
Magnetospirillum sp. SO-1, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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11606..11947
DNA (342bp) protein (114aa)
Uncharacterized protein Tax=Magnetospirillum sp. SO-1 RepID=M2Z3S2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EME69020.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum sp. SO-1.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_404_12
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12126..13712
DNA (1587bp) protein (529aa)
Metallo-beta-lactamase, putative Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IXY2_RHOCS
metallo-beta-lactamase
Metallo-beta-lactamase, putative {ECO:0000313|EMBL:ACJ01156.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_404_13
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13792..14079
DNA (288bp) protein (96aa)
Uncharacterized protein Tax=Rhodospirillum rubrum RepID=Q2RNL5_RHORT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
PLM3_60_coex_sep16_scaffold_404_14
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14085..16508)
DNA (2424bp) protein (808aa)
ATP-dependent protease, putative Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUQ2_RUBXD
ATP-dependent protease
ATP-dependent protease, putative {ECO:0000313|EMBL:ABG04876.1}; species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
PLM3_60_coex_sep16_scaffold_404_15
Brucella sp. 83/13, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16517..17242)
DNA (726bp) protein (242aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella sp. 83/13.;"
Thiamine import ATP-binding protein thiQ Tax=Brucella melitensis RepID=D1FAP6_BRUML
thiQ; thiamine ABC transporter, ATP-binding protein
PLM3_60_coex_sep16_scaffold_404_16
Aeromonas hydrophila, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17229..18854)
DNA (1626bp) protein (542aa)
phosphate ABC transporter permease Tax=Aeromonas hydrophila RepID=UPI0002EE96B2
thiP; thiamine ABC transporter permease
Thiamine/thiamine pyrophosphate ABC transporter, permease {ECO:0000313|EMBL:EKB27517.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas.;" source="Aeromonas hydrophila SSU.;"
PLM3_60_coex_sep16_scaffold_404_17
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18818..19819)
DNA (1002bp) protein (334aa)
thiamine ABC transporter substrate-binding protein Tax=Hoeflea sp. 108 RepID=UPI00036EE029
Thiamine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGM33626.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
thiamine ABC transporter, periplasmic binding protein
PLM3_60_coex_sep16_scaffold_404_18
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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20195..21952
DNA (1758bp) protein (586aa)
Methyl-accepting chemotaxis sensory transducer Tax=Thalassospira profundimaris WP0211 RepID=K2M949_9PROT
Chemotaxis protein {ECO:0000313|EMBL:KJE36707.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
methyl-accepting chemotaxis sensory transducer
PLM3_60_coex_sep16_scaffold_404_19
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22181..22477)
DNA (297bp) protein (99aa)
Uncharacterized protein Tax=Rhizobium sp. AP16 RepID=J2DBL4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK80092.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
YCII-related domain-containing protein
PLM3_60_coex_sep16_scaffold_404_20
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

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comp(22556..23164)
DNA (609bp) protein (203aa)
Uncharacterized protein Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8K5_SPHTD
hypothetical protein
Tax=RBG_16_Chloroflexi_64_43_curated
PLM3_60_coex_sep16_scaffold_404_21
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23245..23943
DNA (699bp) protein (233aa)
Putative azaleucine resistance protein AzlC Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLV6_9PROT
Putative azaleucine resistance protein AzlC {ECO:0000313|EMBL:EFH11715.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
putative branched-chain amino acid permease (azaleucine resistance)
PLM3_60_coex_sep16_scaffold_404_22
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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23927..24232
DNA (306bp) protein (102aa)
hypothetical protein Tax=Kaistia granuli RepID=UPI00035EB8C8
Branched-chain amino acid transport protein (AzlD) {ECO:0000313|EMBL:EFH11714.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
membrane protein
Displaying 22 items

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