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PLM3_60_coex_sep16_scaffold_461

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_461_1
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..314
DNA (312bp) protein (104aa)
spermidine/putrescine ABC transporter permease Tax=Xanthobacteraceae RepID=UPI00036D661D
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KDR90334.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens GW4.;"
binding-protein-dependent transporters inner membrane component
PLM3_60_coex_sep16_scaffold_461_2
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(311..1240)
DNA (930bp) protein (310aa)
Uncharacterized protein Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6INK5_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99102.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
PLM3_60_coex_sep16_scaffold_461_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1251..2054)
DNA (804bp) protein (268aa)
HAD-superfamily hydrolase, subfamily IIB family protein Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HXL1_ACHXA
HAD-superfamily hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
PLM3_60_coex_sep16_scaffold_461_4
Geminocystis sp. NIES-3709, Geminocystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(2113..5934)
DNA (3822bp) protein (1274aa)
Na-Ca exchanger/integrin-beta4 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XZR1_LEPCP
Alkaline phosphatase {ECO:0000313|EMBL:BAQ65192.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Geminocystis.;" source="Geminocystis sp. NIES-3709.;"
Na-Ca exchanger/integrin-beta4
PLM3_60_coex_sep16_scaffold_461_5

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6154..7053
DNA (900bp) protein (300aa)
proline-specific peptidase (EC:3.4.11.5)
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) Tax=uncultured nuHF2 cluster bacterium HF0770_13K08 RepID=E7C720_9BACT
Predicted hydrolases or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ADI23244.1}; species="Bacteria; environmental samples.;" source="uncultured nuHF2 cluster bacterium HF0770_13K08.;"
PLM3_60_coex_sep16_scaffold_461_6
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7064..7957
DNA (894bp) protein (298aa)
UPI00039D28F2 related cluster Tax=unknown RepID=UPI00039D28F2
hydrolase
Hydrolase {ECO:0000313|EMBL:AJC68213.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae EC1.;"
PLM3_60_coex_sep16_scaffold_461_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8161..8934
DNA (774bp) protein (258aa)
Putative uncharacterized protein Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HY92_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHK54302.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_461_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8943..9353)
DNA (411bp) protein (137aa)
Uncharacterized protein Tax=Phyllobacterium sp. YR531 RepID=J3HLR2_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ETR74973.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_461_9
bacterium YEK0313, Bacteria

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comp(9377..10228)
DNA (852bp) protein (284aa)
hypothetical protein Tax=Rhizobium giardinii RepID=UPI000363BBED
Multiple antibiotic resistance protein MarA {ECO:0000313|EMBL:CEJ14206.1}; species="Bacteria.;" source="bacterium YEK0313.;"
AraC family transcriptional regulator protein
PLM3_60_coex_sep16_scaffold_461_10
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10646..16126
DNA (5481bp) protein (1827aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
GAF sensor hybrid histidine kinase (EC:2.7.13.3)
GAF sensor hybrid histidine kinase Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IBV8_METNO
PLM3_60_coex_sep16_scaffold_461_11
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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16142..18049
DNA (1908bp) protein (636aa)
Two-component response regulator Tax=Azospirillum amazonense Y2 RepID=G1XVY5_9PROT
Two-component response regulator {ECO:0000313|EMBL:EGY02570.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
two-component response regulator
PLM3_60_coex_sep16_scaffold_461_12
Coleofasciculus chthonoplastes, Coleofasciculus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(18098..19309)
DNA (1212bp) protein (404aa)
Putative uncharacterized protein Tax=Coleofasciculus chthonoplastes PCC 7420 RepID=B4VJ48_9CYAN
Putative uncharacterized protein {ECO:0000313|EMBL:EDX78098.1}; species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Coleofasciculus.;" source="Coleofasciculus chthonoplastes PCC 7420.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_461_13
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19827..22979
DNA (3153bp) protein (1051aa)
Putative calcium-binding protein Tax=Chamaesiphon minutus PCC 6605 RepID=K9UBE2_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:KFC71647.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
putative calcium-binding protein
Displaying 13 items

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