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PLM3_60_coex_sep16_scaffold_699

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_699_1
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..747)
DNA (747bp) protein (249aa)
ABC transporter ATP-binding protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DAE7_BRAJP
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KJC38355.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_699_2
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1240..2172
DNA (933bp) protein (311aa)
Transcriptional regulatory protein Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DAE6_BRAJP
LysR family transcriptional regulator {ECO:0000313|EMBL:KJC56500.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
transcriptional regulator
PLM3_60_coex_sep16_scaffold_699_3
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2306..2779)
DNA (474bp) protein (158aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PEL4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX60807.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_699_4
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2798..3313)
DNA (516bp) protein (172aa)
Uncharacterized protein Tax=Cystobacter fuscus DSM 2262 RepID=S9PEL4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EPX60807.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_699_5
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3357..3767)
DNA (411bp) protein (137aa)
activator of HSP90 ATPase Tax=Rhizobium gallicum RepID=UPI00036BFB91
Polyketide cyclase {ECO:0000313|EMBL:KGE02129.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
Activator of Hsp90 ATPase 1 family protein
PLM3_60_coex_sep16_scaffold_699_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3764..4087)
DNA (324bp) protein (108aa)
ArsR family transcriptional regulator Tax=Bradyrhizobium elkanii RepID=UPI00031F589F
Bradyrhizobium elkanii strain UASWS1015 Contig179, whole genome shotgun sequence {ECO:0000313|EMBL:KIU47675.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ArsR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_699_7
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4171..4596
DNA (426bp) protein (142aa)
hypothetical protein Tax=Rhizobium loti RepID=UPI00037A9141
RmlD substrate binding domain protein {ECO:0000313|EMBL:AID31556.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
NmrA family protein
PLM3_60_coex_sep16_scaffold_699_8
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4682..5050
DNA (369bp) protein (123aa)
UPI0003CF44B6 related cluster Tax=unknown RepID=UPI0003CF44B6
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESW84638.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
ArsR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_699_9
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5047..5586
DNA (540bp) protein (180aa)
ATPase Tax=Methylocystis rosea RepID=UPI0003648592
activator of Hsp90 ATPase 1 family protein
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:CCJ06919.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
PLM3_60_coex_sep16_scaffold_699_10
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

Not on your lists

5710..6579
DNA (870bp) protein (290aa)
Tax=RBG_16_Armatimonadetes_67_12_curated
PLM3_60_coex_sep16_scaffold_699_11
unknown

Not on your lists

6680..7027
DNA (348bp) protein (116aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_699_12
Mesorhizobium sp. LNHC232B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7164..8396
DNA (1233bp) protein (411aa)
UPI0003CED276 related cluster Tax=unknown RepID=UPI0003CED276
Uncharacterized protein {ECO:0000313|EMBL:ESY63372.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC232B00.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_699_13
unknown

Not on your lists

8672..8983
DNA (312bp) protein (104aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_699_14
unknown

Not on your lists

comp(9006..9173)
DNA (168bp) protein (56aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_699_15
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9318..9995)
DNA (678bp) protein (226aa)
Putative uncharacterized protein Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6Y845_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH12083.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
Isoprenylcysteine carboxyl methyltransferase
PLM3_60_coex_sep16_scaffold_699_16
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10298..11368
DNA (1071bp) protein (357aa)
ABC transporter ATP-binding protein Tax=alpha proteobacterium BAL199 RepID=A8TVM7_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EDP63357.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
ABC transporter ATP-binding protein
PLM3_60_coex_sep16_scaffold_699_17
R_RIF_OD1_09_50_20, RIF-OD1-9, Parcubacteria, Bacteria

Not on your lists

11396..11884
DNA (489bp) protein (163aa)
hypothetical protein Tax=Methylomonas sp. MK1 RepID=UPI0003719EB7
hypothetical protein
Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_09_50_20_curated
PLM3_60_coex_sep16_scaffold_699_18
unknown

Not on your lists

12088..12438
DNA (351bp) protein (117aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_699_19
unknown

Not on your lists

12736..13104
DNA (369bp) protein (123aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_699_20
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13288..13524)
DNA (237bp) protein (79aa)
Uncharacterized protein Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CJT7_AGRT5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJX89087.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium; radiobacter).;"
PLM3_60_coex_sep16_scaffold_699_21
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13541..14374)
DNA (834bp) protein (278aa)
Short-chain dehydrogenase/reductase SDR Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8ENT4_METSB
Short-chain dehydrogenase {ECO:0000313|EMBL:KGM32863.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
short-chain dehydrogenase/reductase SDR
PLM3_60_coex_sep16_scaffold_699_22
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14515..15417)
DNA (903bp) protein (301aa)
Transcriptional regulator Tax=Rhizobium sp. CF122 RepID=J2IXD4_9RHIZ
LysR family transcriptional regulator {ECO:0000313|EMBL:KGM32862.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
ycaN6; transcriptional regulator2C LysR family
PLM3_60_coex_sep16_scaffold_699_23
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15642..16859
DNA (1218bp) protein (406aa)
Adenylate/guanylate cyclase Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJ61_9RHIZ
adenylate cyclase
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
PLM3_60_coex_sep16_scaffold_699_24
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17371..18435)
DNA (1065bp) protein (355aa)
hypothetical protein Tax=Zavarzinella formosa RepID=UPI00030A6855
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:EDP63859.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
malate/L-lactate dehydrogenase family protein
PLM3_60_coex_sep16_scaffold_699_25
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18468..19418)
DNA (951bp) protein (317aa)
hypothetical protein Tax=Hyphomicrobium zavarzinii RepID=UPI0003713423
choline/ethanolamine kinase
Putative Choline/ethanolamine kinase {ECO:0000313|EMBL:CCB67137.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
PLM3_60_coex_sep16_scaffold_699_26
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19699..22236)
DNA (2538bp) protein (846aa)
Putative methyl-accepting chemotaxis receptor Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z9H0_AZOL4
chemotaxis protein
Chemotaxis protein {ECO:0000313|EMBL:AIB12788.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
PLM3_60_coex_sep16_scaffold_699_27
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22283..23458)
DNA (1176bp) protein (392aa)
Extracellular ligand-binding receptor Tax=Roseibium sp. TrichSKD4 RepID=E2CP63_9RHOB
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EFO29256.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
extracellular ligand-binding receptor
PLM3_60_coex_sep16_scaffold_699_28
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23735..24019)
DNA (285bp) protein (95aa)
Chemotaxis sensory transducer Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SL08_THIDA
chemotaxis sensory transducer
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ96613.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Displaying 28 items

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