ggKbase home page
Advanced Search
Search Help

PLM3_60_coex_sep16_scaffold_104_6

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 4029..9332

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain KMS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 896.0
  • Bit_score: 438
  • Evalue 2.60e-119
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P9F5_DESSD similarity UNIREF
DB: UNIREF100
  • Identity: 32.6
  • Coverage: 862.0
  • Bit_score: 466
  • Evalue 1.10e-127
UDP-N-acetylmuramyl pentapeptide synthase similarity KEGG
DB: KEGG
  • Identity: 32.6
  • Coverage: 862.0
  • Bit_score: 466
  • Evalue 3.10e-128

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Mycobacterium sp. KMS → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 5304
ATGCCGCTCTGGTCTGCGGATGAACTCGCGGCGATCACCGGCGGTCGCTGGCTGGATGCGCGCCCGCCGGCGCGGCTGCCCACGGGCATCACCTACGATTTCAGCTACCAGCGGCCCGGCGATCTGTTTGTGACGATGAATTCGCAGACCTACGACCGTGGCGAGACGGATGCCGTCGGGCCGCTGACCTGGGATTCGGCGAACCGCCTGCGGGAACTGCAGGCCCTGGGCTGCGCCGGCGCCATCGTCGAACGGGACGTCGCGGATGCTCCGCCGGGCTTCCCGCTGCTGCGCGTCGCCGACTCCGCCAACGCCGTCGGGGATCTGGCCGCCGCCGGCCGTGCCCGCTTCCGCGGCGCGCTGATCGCGGTGACAGGAACCGTCGGCAAATCGACGACTCGGGAAATGATTCGCCATGCGCTGTCGCACCAGGCCGAGACATTCGGCTATGCCGGAAACTTCAATACCTATTTCGGCATGGCGCTGTGCATGAGCCAGCTCAATCCGAAATCCGCCTACGCGGTCTTCGAAGTGGCCATGAGCGCCCTGCATCGGAAAGACAAACCGATTGCCAAACAATTGCGCCCCGCTGTCGCGATCATCACAGCCATCGCCCGCGAACAGACCGATCTGGCGCCCACGCTCGACCACACCGTTCGCTTCAAGGCGCGGCTGTTCAAGGGGCTGACGCCGGACGGCACGGCGATCATCAACCGCGATATGGACATGTTCGATGCGGTCCTGGAACGGGCCCAGAGATTTCGCGCGCCGCGCATCGTGACCTATGGCCGCCATCCGGAGGCGGATATCCGCCTGCTCGACTGCCAGCTCCACAGCGAATACAGCGACGTCCGCGCGGCCGTGCATGGCGACGCGATCGCCTATGAGGTTCCGGTTCCCGGTAGCTCGATGATCGCTAACTCCCTGGCGATGCTGGCGGCAGTGGAGGCCATCGGCGCCGATTGGCGGCAGGCGGCGCGCGATCTGGCGTCCTATAAGACCCGGCACGGACGGCTGCAGCGTTTTCGCGTGCCGATCGGCAACGGCCATTTCGATCTGATCGACGACACCTGGAACAACACGGAAGCGGCGATGCTCGCCAGTTTCGAGGTGTTGCGGCTGTCCGAGCCGTCGCCCGGCGGCCGTCGCATCGCGGTGCTGCAGCAGATCGGCTGGATCGACGGCATCTCCCGCGAAGTCCATGCCGGCTTGGCCGGGCCGCTCAGGGAATCGCGCGCCGATCGCGTGTTCACGATGGGCGATGAGATGCTGCATCTGCGCGAGCATCTGCCGCCGGAGATGCTGGGACGTCACGCGGCGTCCGCCGATGAACTCGTCGCGGCGGTGTTGGACGAGCTGCGCCCCGGCGATGTCGTCTCGGCCAAGGGATCCAGCATTACCGCCGGTTTCGATGACGTCATGCGCCGGCTCCGGCGCGGCCGTCCGTCAATTCCGACATCGAGCGCAACCCCGGAGGGCCGGATCGAGCGCGGACCCGTGCAATTGCGCGACCGGCGCGAGGTCAGCATCAACCTGCTCGGCGACTTCTATCTCGGCGACTCCTATCAGCGGCTTCGCGAAAGGCGCGGCGGCGTCAATTATCTCCGCCAGCACGGCTATTCCTATTCGCTGCGCAATATCGGCGATTTCCTCCGCAGCGCCGATTTCTCCGTGGTGAACTTCGATGGCGTGCTCACGCGCCCGGTCAAATCGCCGATCGCCGGACAGAAGAAATGGCTTTTCGATGCCGATCCGGAGCGGACATTGAAGACGCTGCGATCCCATAAGATCGGCGCGGTGGCGCTGGGCAACAATCACAGCTTCGACTTCGGCCTCGATGCGCTTTGGGCCATGCTCGCGCAGTTCGCCAGGGCCGGCATCCATTATTTCGGCGCGGACCGGCGCGTCGGCGCCGCCGCTCAGCCGCTGCGCATCCAGGCCAATGTTAATGGCCGGCAGTTGGGCGTGCAGATTTTCTCCGCGCTGCAATATAGCCGAAAAATCGACGAGGAGCTGAAAGTTCTGGCGGGCCCGGGGCAGGGCGGTGTCGCCTGCCTGTCCGAGGAAGTCATCGCCGCCATTGCCACCGCGCGCCAGGCCGCCCCTCAGGACCTGATAATCGCCTTTCCCCATTGGGGCGCGGGCTATTCCTGGCGGGTTCCGGCGCAGAAGGAGATGGCGGCCTGGCTGATCGGCGCCGGCGCCGATCTCGTGATCGGCCATGGCGCCCATATGCTGCAGGAGATCGAGCGAGTCGAGGGAGGCTGGGCCATCAATGGCCTCGGCAACTCGATCTTCAACAACGAAGGCGAGTATGCGGACCGCAAAGTGCCGCCCTACAGCCTCGCGGCGCGATTGGAGCTGTCGAACGTCGACGGGAATCTTGTCCGCGGTCTGAAGCTGTATCCATTGCTCTCCGACAATCAGCGAACGGACTTCCGCCCCCGTTTCGTCGATGCGCCCGAGTTCGATGCCGTGAAAGCGCTGCTGATGGGTCGGAGCGCCGAACTCGCCAAGGAGATCGAGGCGTTTTCCACGGGATACGACCGGTTTGGCTGGTACCTCCGGATACTGTTCGACAAGCCGTCGCCGGCGAAACTGCGCGCTGCCGCACCGCAACGAGAACAAGTGGAAACCAGGACCTTAACCGAAGCGATCACGCAGCCATTGCCGGCGTCCCGTGGCGATCCGCTGGCGCTTTGGGATGCCCAGGAGTTGATGGCGGCGACCGACGGATTCTGGGTCGCGGAACCGCCGGCCGGCTGGCGTGCGACCGGCGTGAGCATGACCCGCAGGTGGAGCAGGCCGGGTGACGTATTCATTTGCATGGATGCCGCGACCTGGCACCGTGCTGAGGCGACGGCCGGGCCGGAAGCCATGAAGGAGACCTGGGACACGGCGCAAGATATTGCCGGCCTGCAGGCGTTGGGCGCCGCCGCGGCCATCGTGCAGCGGGAGGTCGCCAACCTGCCGGGAAACTTTCCGGTCTTGCGCGTCGAAGATTCCGCTCAGGCGATCATCAATCTGGCTGCGGCCGCGCGGGCGCGGTTCACGGGCAAGGCCATCGGCGTGACGGGAACGGTCGGGAAGACGACCACGCGGGAGATGCTCAAGCATGTTCTGGGCCTTCAAGGCACGACATCGGGCACGACGGCAAACTTCAACACGCGGCTGGGCGTGCCCTACAGCGTCGCGCAGACTCCGGCGGACGCCGACTACGCCGTTTTCGAAATCGCGGTCAGCGCGCTCTATGCCAATACCGGGCCGGCATCGCTGTTCGTTCTGCCGCATGCGGCGATTTTCACCAATGTTGGGATGGCGCACCTCACTCATACGAAGAATGTCGGAAACACGGCCCGCTACAAATCGCGCATCTTCCAAGGGCTGGTCGCCGGCGGCGTTGCCATCATCTATCGGGATATGGAGATGTTCCCCCTGGTGTCCCAGCTTGCCAAGGAATACGGCGCCGGGGAGATCATTACCTTCGGTGAATCGGACGAGGCGAATATCAGGCTGTGCGAGGCTGACATGGTGCCGGATCACAGCCGCGTCACGGTCGATGTCTTCGGTGAGCCGGTCAGCTATGAAGTGCCGATCGCCGGCAAGGGCATGATCATGAATTCGCTGGCCTGTTTGGCGACGGCGAAAGCCGTTGGGGCGGACTGGCGCCAGGCCGCCGCTGACCTTGCCTTCTATCGCACGAAGACCGGCCGTCTTCGCCGCTGGCGGCTGCCGGTGGACGGCGGATTCTGGGAGTTGATCGATGACGCCGCCAATGCCGCGCCGATGTCGATGAAGCAGGGGATCGAGGCGCTGGGATTGGCGCAGCCCACGCCGGGCGGCCGGCGTATCGCGGTTCTCGGACGCATGGCGGAATTGGGCGACAGAACGCTTGAGATGCACGCCCGGTTGGCGCCCGTTCTTCTAGGCGCCAGGATCGACAAGCTGTTCACGGTTCATGACGAGCTCAAGGTTCTCCGCGACGGGCTGCCGCCGGGCATGCTGGCGCCGCACGCCGACAGCACGAGCGACCTGATGCGAGAGGTGTTGGCCGATGTCCGGCCCGGGGACGTGGTTCTCGTCAAGGGTTCTCACAGCGGCTCCGATTTCTACAGACTGCCGGAATACATACGAAATGGCCCGCCGGCCAATGGCGACGGCGCCACCGATGGCGCTCCTCTGGCACGGAAGGTCGATGCAGAGGCGACCGCGAAAACCGTCCATCTCACCGCCCGACACAACCTGGATGTATGTCTGATCGGCGATACCTATTTCGGCGAATTCTACCAGGAACTCCGCAAGACGCGGGATTTGCCGAACTATCTGGCGATCAGAGGCTATAATTATTCTCTTGAACGTTTTGCCCCCTTCCTGCAGTCGGCGGATTATGCCGTCGTCAATCTGGAAGCCACGCTGACCGAGCGGGGTGCCTCGCCCTTCAGCGGCATCAAGGACTGGATCTTGAAGGGCGATCCGGCCAAGACCCTGGCCACATTGAAAACCGCCAGCATCGGCGCCGTGGCCCTCGGCAACAACCACACGATCGACTATGGCCGGGAAGCGCTCGACGATACGTTGAGCGCCGTTCGGTCGGCCGGAATGATCAGCTTTGGCGCCGGCCGGAATGCGGGCGAAGCCGCCGCTCCGCTTGAGATCAACCTGTCGCTCGCGAGTGGAAGACGGCAACTCGCCGTGTTCTCCGCCTACCAGCACAGCCGGGAGTATGAGGAGCATTTCAAGGGGTACGCCCGCGGTCTCGAAGGCGGCGTTGCCTGTATCGACGAGACATACTTCGCCTCGATCAGGAGGTGGAAGGAAAAAAATCCAAACGGAGTCGCAATCGCCTTTCCCCATTGGGGAAGAAACTATATGTGGCGCACCGCCGACCAGCAGCGGATCGCCGACAAGCTGATCGATACCGGCGTCGATCTCATCATCGGCCATGGGGCGCATATGATGCAGGAAATCGAAATGCGGCGCGATCGCTTGATCGTCTACAGCATCGGCAACGGCTATTTCGGCAGCGAAGGTGAATATGCGCGGCGCGACATGCCGCCTTACAGCCTCCTGGCGCGCCTCAATCTCGGCGATCGCGGCGGCAAGCCGGCGCTGTCGCTTCGGCTGTACCCGATTGTGTCGGACAATCAGAAGACGCGCTTTCAGCCCCGCTTGGTGACCGTCGAGGAGTTCATGAATGTGAATACTGTCCTGGAAATGCGGAACCCCGACTTGTTCAAGGCATCGTCTCCCTTGCGCCGCGAACGGGATGAATTCGGCTGGTACATCGAGCTGGCGGTCAACTAG
PROTEIN sequence
Length: 1768
MPLWSADELAAITGGRWLDARPPARLPTGITYDFSYQRPGDLFVTMNSQTYDRGETDAVGPLTWDSANRLRELQALGCAGAIVERDVADAPPGFPLLRVADSANAVGDLAAAGRARFRGALIAVTGTVGKSTTREMIRHALSHQAETFGYAGNFNTYFGMALCMSQLNPKSAYAVFEVAMSALHRKDKPIAKQLRPAVAIITAIAREQTDLAPTLDHTVRFKARLFKGLTPDGTAIINRDMDMFDAVLERAQRFRAPRIVTYGRHPEADIRLLDCQLHSEYSDVRAAVHGDAIAYEVPVPGSSMIANSLAMLAAVEAIGADWRQAARDLASYKTRHGRLQRFRVPIGNGHFDLIDDTWNNTEAAMLASFEVLRLSEPSPGGRRIAVLQQIGWIDGISREVHAGLAGPLRESRADRVFTMGDEMLHLREHLPPEMLGRHAASADELVAAVLDELRPGDVVSAKGSSITAGFDDVMRRLRRGRPSIPTSSATPEGRIERGPVQLRDRREVSINLLGDFYLGDSYQRLRERRGGVNYLRQHGYSYSLRNIGDFLRSADFSVVNFDGVLTRPVKSPIAGQKKWLFDADPERTLKTLRSHKIGAVALGNNHSFDFGLDALWAMLAQFARAGIHYFGADRRVGAAAQPLRIQANVNGRQLGVQIFSALQYSRKIDEELKVLAGPGQGGVACLSEEVIAAIATARQAAPQDLIIAFPHWGAGYSWRVPAQKEMAAWLIGAGADLVIGHGAHMLQEIERVEGGWAINGLGNSIFNNEGEYADRKVPPYSLAARLELSNVDGNLVRGLKLYPLLSDNQRTDFRPRFVDAPEFDAVKALLMGRSAELAKEIEAFSTGYDRFGWYLRILFDKPSPAKLRAAAPQREQVETRTLTEAITQPLPASRGDPLALWDAQELMAATDGFWVAEPPAGWRATGVSMTRRWSRPGDVFICMDAATWHRAEATAGPEAMKETWDTAQDIAGLQALGAAAAIVQREVANLPGNFPVLRVEDSAQAIINLAAAARARFTGKAIGVTGTVGKTTTREMLKHVLGLQGTTSGTTANFNTRLGVPYSVAQTPADADYAVFEIAVSALYANTGPASLFVLPHAAIFTNVGMAHLTHTKNVGNTARYKSRIFQGLVAGGVAIIYRDMEMFPLVSQLAKEYGAGEIITFGESDEANIRLCEADMVPDHSRVTVDVFGEPVSYEVPIAGKGMIMNSLACLATAKAVGADWRQAAADLAFYRTKTGRLRRWRLPVDGGFWELIDDAANAAPMSMKQGIEALGLAQPTPGGRRIAVLGRMAELGDRTLEMHARLAPVLLGARIDKLFTVHDELKVLRDGLPPGMLAPHADSTSDLMREVLADVRPGDVVLVKGSHSGSDFYRLPEYIRNGPPANGDGATDGAPLARKVDAEATAKTVHLTARHNLDVCLIGDTYFGEFYQELRKTRDLPNYLAIRGYNYSLERFAPFLQSADYAVVNLEATLTERGASPFSGIKDWILKGDPAKTLATLKTASIGAVALGNNHTIDYGREALDDTLSAVRSAGMISFGAGRNAGEAAAPLEINLSLASGRRQLAVFSAYQHSREYEEHFKGYARGLEGGVACIDETYFASIRRWKEKNPNGVAIAFPHWGRNYMWRTADQQRIADKLIDTGVDLIIGHGAHMMQEIEMRRDRLIVYSIGNGYFGSEGEYARRDMPPYSLLARLNLGDRGGKPALSLRLYPIVSDNQKTRFQPRLVTVEEFMNVNTVLEMRNPDLFKASSPLRRERDEFGWYIELAVN*