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PLM3_60_coex_sep16_scaffold_635_19

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: 16980..19253

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein D Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4A2_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 41.9
  • Coverage: 754.0
  • Bit_score: 510
  • Evalue 1.70e-141
Type II secretion system protein D {ECO:0000313|EMBL:GAK33411.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.2
  • Coverage: 778.0
  • Bit_score: 580
  • Evalue 1.80e-162
xpsD_[H]; General secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 40.4
  • Coverage: 767.0
  • Bit_score: 484
  • Evalue 4.80e-134

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Taxonomy

alpha proteobacterium Q-1 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2274
TTGAAAGTGGAACTGCCAATCAAGGGGACAAGCGGTATTGCGTGCCGCTTCGCGAGTCTCGCTGGCCTGATCGTCTTCTGTTCTGTTCTCGCCGGCTGCGAGAGCGCTCCGCGGGCGCCGGGCGCCTCGGAAACACCCGCTTCAACAACGGGCATTGACCAACCGACGCCACTGACCGGTCCCGTCAGCGCGGAATCGGCGCCTCAGGTTTCCGGAGGATCGCCGCTACCCGGCCCAGAGATTTACCCGGGGCGTGGCGTGTCGTTGCAGACGCAAGCGGCACAACCACCAGTCGCCATCGCTGAAGGCGGTGACGTCGTCCTCAATTTCGTTAACACCGAAGTACGCGAATTCGTTGATACTGTGCTCGGAAAGTTGCTCGGCGTCGGCTACGTCATCGACCCTCGCGTGCAGGGAACCGTCACGCTACAGACGGCCCGGCCGGTGCCCCGGAGCTCTGTAATCGGCGTGATTGAGGACGTACTCGCCATGAACGGCGCGGCTCTCGTCCAAAGCGGAGACGTTTACAAAGTCATTCCTCTGGAAACCGCCGTCTCGGCACCGGCGATCCTCAGTCCCGGCGCGGCGCCTGTGCGGCTGGACCGTGGGTTCAGCCTTCACGTCATCCCGCTCCGCTACGCTTCGGCCACGGCATTGCGCGAGGTGGTTGAACCGTTCATCCCGCCGGGCCGCGTTCTTCGCGTCGACGCCGACCGCAATTTGTTCATTTTTGCCGGCACCGGCCCGGAGGCCGCCGATTTTACTGAGCTTGTCACAATCTTCGATCTCGACTGGATGGCGGGCAAGTCCTTTGGCCTGTTCCCGCTGAAGTTCGCCGACCCTAAGGATGTCGCGACGGAACTCGCGCACGTGTTCGGCAAAGGCGCTGCCGGATTGCCGGCCGGCATCGTCGATATTGTTCCGATCGATCGGCTTAGCGCCGTACTTGTGATTGCGCCACAAGAGGCCCTTCTGAGGGAGGCGCGTACCTGGGTTGAACGGCTCGACCGGGGGGTCGAAACTGACCGTCGCCAGCTTTTCGTCTATTACGTTCAGAATGGCCGCGCGACAGAACTTGCCGATGCGCTAGGCCAAGCCTTTGCCATCACCGCCGTGGCAACCGCTGCAGCTGACTCCGGCCCGCGACTCGCCCCGGGGCTGACCCCCATCGAGCTATCGCAACCGCAGGCCACGACCGGGCAAGAGTCGTCCACCTCGGCTGACACGTCATCGCCTGCTGATTTCGCCTCGTCGCAAACGCAGTATTTGGCAGAGCGCGGCGCTGGCGGCCTTCCGGTACTAGGTATCGGCGCACCTGGTTCGCCTGGCGTTGGTGCCGAAGACACCTTGCGAATCGTCGCGGACGCGCGCAACAACGCCCTGCTTGTTTATGCAACACCCGATGAATATCGGATGATCGATGCCGCACTCAAGAAACTCGATATCGTGCCGCTGCAGGTACTCATCGAAGCGACAATCGCCGAAGTGACGCTGAACGACTCCCTGAAGTATGGCCTTGAGTGGTTCTTCGACATCGGCAACAGCACACTCACGTTCAACACAAGCGAAACAAGTACCCCTACGCCGACGCCTAATCTAATACTCTCGCAGTTTCCGGGGTTTTCGTATATCTTCGCCGCGGAAGACGTCAAGATCGTGCTCAATGCGTTGACTCAGATCACTGATGTCAAAGTGATATCCTCGCCGCAACTCATGGTCCTCGACAATGAACCGGCGCGGCTGCAGGTTGGCGACCAAGTCCCCGTGGCTGTCAGAACTTCACAGTCGACGGACGTCACGACGGATGCGCCGATCGTCAGCGAGATCGAGTACCGGGACACCGGCGTGATCCTCGACATCATCCCGCGCGTCAACGCAAGCGGCCTCGTTGTTCTGGATATCATTCAGGAAGTCAGCGACGTGGTGCCGACAGTGGTGACGGCAAACACCACAACTGCGACGCAGGCCCAGACGCCCACAATCTCTCAGCGTCGCATCGCCAGTACTGTTGCGATCAACAGCGGTGAGACGGTGGCGCTCGGCGGTCTGATCCGCGACAGCGCCACCAATTCGGTGACGGGTGTGCCGCTGCTATCGGAGATTCCTTTGCTGGGCAACCTGTTCAAGACAACGACGGATACCACGCGTCGAACCGAGTTGCTCGTGCTGTTGACGCCACGGGTCGTACGCGATCGTCATGATGCCCGAGCTGTGACGGATGAACTCCGCCAACGGCTGCGTGGGCTGGTACCGCTGACCGAAAAGATCCAGTAG
PROTEIN sequence
Length: 758
LKVELPIKGTSGIACRFASLAGLIVFCSVLAGCESAPRAPGASETPASTTGIDQPTPLTGPVSAESAPQVSGGSPLPGPEIYPGRGVSLQTQAAQPPVAIAEGGDVVLNFVNTEVREFVDTVLGKLLGVGYVIDPRVQGTVTLQTARPVPRSSVIGVIEDVLAMNGAALVQSGDVYKVIPLETAVSAPAILSPGAAPVRLDRGFSLHVIPLRYASATALREVVEPFIPPGRVLRVDADRNLFIFAGTGPEAADFTELVTIFDLDWMAGKSFGLFPLKFADPKDVATELAHVFGKGAAGLPAGIVDIVPIDRLSAVLVIAPQEALLREARTWVERLDRGVETDRRQLFVYYVQNGRATELADALGQAFAITAVATAAADSGPRLAPGLTPIELSQPQATTGQESSTSADTSSPADFASSQTQYLAERGAGGLPVLGIGAPGSPGVGAEDTLRIVADARNNALLVYATPDEYRMIDAALKKLDIVPLQVLIEATIAEVTLNDSLKYGLEWFFDIGNSTLTFNTSETSTPTPTPNLILSQFPGFSYIFAAEDVKIVLNALTQITDVKVISSPQLMVLDNEPARLQVGDQVPVAVRTSQSTDVTTDAPIVSEIEYRDTGVILDIIPRVNASGLVVLDIIQEVSDVVPTVVTANTTTATQAQTPTISQRRIASTVAINSGETVALGGLIRDSATNSVTGVPLLSEIPLLGNLFKTTTDTTRRTELLVLLTPRVVRDRHDARAVTDELRQRLRGLVPLTEKIQ*