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PLM3_60_coex_sep16_scaffold_635

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_635_1
Nostoc sp. PCC 7107, Nostoc, Nostocales, Cyanobacteria, Bacteria

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1..726
DNA (726bp) protein (242aa)
Putative polysaccharide pyruvyl transferase Tax=Nostoc sp. PCC 7107 RepID=K9QF49_9NOSO
putative polysaccharide pyruvyl transferase
Putative polysaccharide pyruvyl transferase {ECO:0000313|EMBL:AFY43978.1}; species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc.;" source="Nostoc sp. PCC 7107.;"
PLM3_60_coex_sep16_scaffold_635_2
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1450..1794
DNA (345bp) protein (115aa)
BNR/Asp-box repeat-containing protein Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WKT5_BURSC
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19036.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
BNR/Asp-box repeat-containing protein
PLM3_60_coex_sep16_scaffold_635_3
unknown

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comp(2545..2694)
DNA (150bp) protein (50aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_635_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2757..3833)
DNA (1077bp) protein (359aa)
Sulfotransferase family protein Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PA63_DESSD
sulfotransferase family protein
Sulfotransferase family protein {ECO:0000313|EMBL:AGF78517.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1).;"
PLM3_60_coex_sep16_scaffold_635_5
alpha proteobacterium MA2, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3824..4201)
DNA (378bp) protein (126aa)
hypothetical protein Tax=Halomonas sp. BJGMM-B45 RepID=UPI0003AE86CB
Uncharacterized protein {ECO:0000313|EMBL:GAK46242.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium MA2.;"
PLM3_60_coex_sep16_scaffold_635_6
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4496..5806)
DNA (1311bp) protein (437aa)
Uncharacterized protein Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FAZ8_DESAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACL04084.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="Desulfatibacillum alkenivorans (strain AK-01).;"
PLM3_60_coex_sep16_scaffold_635_7
Mesorhizobium australicum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5911..6741)
DNA (831bp) protein (277aa)
Uncharacterized protein Tax=Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073) RepID=L0KK19_MESAW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB45697.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium australicum (strain LMG 24608 / HAMBI 3006 / WSM2073).;"
PLM3_60_coex_sep16_scaffold_635_trna_1
unknown

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6907..6979
DNA (73bp)
transferRNA Lys
PLM3_60_coex_sep16_scaffold_635_8
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7595..8359
DNA (765bp) protein (255aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; Flags: Precursor;; species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
Type 4 prepilin-like proteins leader peptide-processing enzyme Tax=Caulobacter sp. AP07 RepID=J2Q272_9CAUL
pulO; type II secretory pathway, prepilin signal peptidase
PLM3_60_coex_sep16_scaffold_635_9
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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8416..10140
DNA (1725bp) protein (575aa)
General secretory pathway protein E Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVJ9_NITHN
General secretion pathway protein E {ECO:0000313|EMBL:CDI02630.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
general secretory pathway protein E
PLM3_60_coex_sep16_scaffold_635_10
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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10145..11365
DNA (1221bp) protein (407aa)
Type II secretion system protein Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVK0_NITHN
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ADE13628.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus halophilus (strain Nc4).;"
PLM3_60_coex_sep16_scaffold_635_11
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11435..11866
DNA (432bp) protein (144aa)
General secretion pathway protein G Tax=Nitrosococcus oceani RepID=Q3J757_NITOC
general secretion pathway protein G
General secretion pathway protein GspG {ECO:0000313|EMBL:KFI18225.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani C-27.;"
PLM3_60_coex_sep16_scaffold_635_12
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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11835..12305
DNA (471bp) protein (157aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000381C5FD
Uncharacterized protein {ECO:0000313|EMBL:ESQ13847.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
xpsH_[H]; General secretion pathway protein H
PLM3_60_coex_sep16_scaffold_635_13
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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12305..12724
DNA (420bp) protein (140aa)
hypothetical protein Tax=Thioalkalivibrio sp. ALE11 RepID=UPI0003827DBA
General secretion pathway protein H {ECO:0000313|EMBL:ESS72322.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" source="Methyloglobulus morosus KoM1.;"
prepilin-type N-terminal cleavage/methylation domain-containing protein
PLM3_60_coex_sep16_scaffold_635_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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12721..13395
DNA (675bp) protein (225aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI0003799171
general secretion pathway protein J
Tax=CG_Hydro_01
PLM3_60_coex_sep16_scaffold_635_15
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13438..14364)
DNA (927bp) protein (309aa)
membrane protein (EC:3.4.24.-)
Membrane protein {ECO:0000313|EMBL:ADE40178.1}; EC=3.4.24.- {ECO:0000313|EMBL:ADE40178.1};; species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster; Candidatus Puniceispirillum.;" source="Puniceispirillum marinum (strain IMCC1322).;"
Membrane protein Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BMY5_PUNMI
PLM3_60_coex_sep16_scaffold_635_16
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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14547..15632
DNA (1086bp) protein (362aa)
hypothetical protein Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00037FE3FA
pefL_[H]; General secretion pathway protein L
General secretion pathway protein L {ECO:0000313|EMBL:AGA33578.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
PLM3_60_coex_sep16_scaffold_635_17
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15637..16227
DNA (591bp) protein (197aa)
General secretion pathway protein M Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K934_NITWC
general secretion pathway protein M
General secretion pathway protein M {ECO:0000313|EMBL:ADJ29177.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain C-113).;"
PLM3_60_coex_sep16_scaffold_635_18
unknown

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16224..16850
DNA (627bp) protein (209aa)
general secretion pathway protein N
PLM3_60_coex_sep16_scaffold_635_19
alpha proteobacterium Q-1, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16980..19253
DNA (2274bp) protein (758aa)
General secretion pathway protein D Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E4A2_9GAMM
Type II secretion system protein D {ECO:0000313|EMBL:GAK33411.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium Q-1.;"
xpsD_[H]; General secretion pathway protein D
PLM3_60_coex_sep16_scaffold_635_20
RBG_16_Gammaproteobacteria_51_14_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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19308..19895
DNA (588bp) protein (196aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI000381F14B
general secretion pathway protein K
Tax=RBG_16_Gammaproteobacteria_51_14_curated
Displaying 21 items

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