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PLM3_60_coex_sep16_scaffold_123_10

Organism: PLM3_60_coex_sep16_Magnetospirillum_magneticum_63_15

near complete RP 47 / 55 MC: 2 BSCG 47 / 51 ASCG 10 / 38 MC: 1
Location: comp(10757..11587)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.5
  • Coverage: 270.0
  • Bit_score: 331
  • Evalue 7.10e-88
Pseudouridine synthase Tax=Magnetospirillum sp. SO-1 RepID=M2Z7Q5_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 61.5
  • Coverage: 270.0
  • Bit_score: 330
  • Evalue 1.10e-87
16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 60.6
  • Coverage: 279.0
  • Bit_score: 328
  • Evalue 1.20e-87

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Taxonomy

Magnetospirillum magnetotacticum → Magnetospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGACCACCAAAGACACCAAGGGAGAACGCATCGCCAAGCTGCTGGCGCGCAGCGGGCTCTGCTCGCGCCGCGACGCCGAGCGCTGGATCGCCGCCGGCCGCGTCAGCATCGACGGCGTGGTGCTGACCTCGCCGGCCATCAACGTGACGCCGGGCATGGCGGTCGCCGTCGACGGCAAGCCGATCCCGCTGAAGGAGCCGGCGCGGTTGTGGCGCTTCTATAAACCGCGCGGCCTCGTGACCACCGCGCGCGATCCGCAAGGACGGCCCACCGTGTTCGACGCCCTGCCCAAGGACATGCCACGGGTGATCTCGGTGGGGCGGCTCGATCTCAGCTCCGAGGGCCTGCTGCTGCTGACGAATGACGGCGAATTGGCGCGGCGTCTGGAGCTGCCGTCGAGCGGCTGGCTGCGCCGCTATCGGGTGCGGGTGCACGGCGCGGTCGATCCGCAAGCGCTGCGCGATCTGGCCAAGGGCATCACCGTCGACGAGATGAATTACGGCCCGGTGCAGGCCACGCTCGATCGCCAGCAGGGCAGCAATGCCTGGATAAACTTTGCCCTGAAGGAAGGCAAGAACCGGGAGATCCGGCGCATCTGCGAACATCTCGGCTGGCCGGTGAGCCGCCTGATCCGCATCGCCTTCGGCCCGTTCGAGCTGGGCGACCTCGCGCCGGGTGCCGTAGAGGAAGTGCCGGCACAATCTATCGAGTCGATGCTCGGTGGGAAAGAAAAGAAAGATTCACCACAGAGGCACAGAGGCACAGAGAAGAAGCGAAGGGTGTCATCCCGGCGAAAGCCGGGGTCCAGGGTTGCAGAGCGCACGTCGTAG
PROTEIN sequence
Length: 277
MTTKDTKGERIAKLLARSGLCSRRDAERWIAAGRVSIDGVVLTSPAINVTPGMAVAVDGKPIPLKEPARLWRFYKPRGLVTTARDPQGRPTVFDALPKDMPRVISVGRLDLSSEGLLLLTNDGELARRLELPSSGWLRRYRVRVHGAVDPQALRDLAKGITVDEMNYGPVQATLDRQQGSNAWINFALKEGKNREIRRICEHLGWPVSRLIRIAFGPFELGDLAPGAVEEVPAQSIESMLGGKEKKDSPQRHRGTEKKRRVSSRRKPGSRVAERTS*