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PLM3_60_coex_sep16_scaffold_4113

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_4113_1
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..979)
DNA (978bp) protein (326aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Queuine tRNA-ribosyltransferase Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X7A7_NAKMY
PLM3_60_coex_sep16_scaffold_4113_2
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1373..2536)
DNA (1164bp) protein (388aa)
Chaperone protein DnaJ Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMH9_MICPN
dnaJ; molecular chaperone DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_4113_3
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2548..3558)
DNA (1011bp) protein (337aa)
Heat-inducible transcription repressor hrcA Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMI0_MICPN
hrcA; heat-inducible transcription repressor HrcA
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_4113_4
BJP_08E140C01_Actinomycetales_67_18, Actinomycetales, Actinobacteridae, Actinobacteria, Bacteria

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3651..4247
DNA (597bp) protein (199aa)
hypothetical protein Tax=Dehalobacter sp. FTH1 RepID=UPI00036951F7
hydrolase
Tax=BJP_08E140C01_Actinomycetales_67_18
PLM3_60_coex_sep16_scaffold_4113_5
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(4453..5106)
DNA (654bp) protein (218aa)
LuxR family transcriptional regulator Tax=Nocardiopsis gilva RepID=UPI000348460A
LuxR family transcriptional regulator {ECO:0000313|EMBL:KIH97905.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
LuxR family transcriptional regulator
PLM3_60_coex_sep16_scaffold_4113_6
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(5103..6362)
DNA (1260bp) protein (420aa)
hypothetical protein Tax=Nocardiopsis chromatogenes RepID=UPI00034B6325
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:ADH67398.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM3_60_coex_sep16_scaffold_4113_7
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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6657..7067
DNA (411bp) protein (137aa)
hypothetical protein Tax=Nocardiopsis gilva RepID=UPI000345296E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH67397.1}; species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis dassonvillei (strain ATCC 23218 / DSM 43111 / IMRU 509 /; JCM 7437 / NCTC 10488) (Actinomadura dassonvillei).;"
PLM3_60_coex_sep16_scaffold_4113_8
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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7254..8306
DNA (1053bp) protein (351aa)
LacI family transcriptional regulator Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMI2_MICPN
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:BAK36439.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 /; NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1).;"
PLM3_60_coex_sep16_scaffold_4113_9
unknown

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comp(8180..8497)
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4113_10
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(8511..9722)
DNA (1212bp) protein (404aa)
Oxygen-independent coproporphyrinogen III oxidase Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XMJ8_MICPN
coproporphyrinogen III oxidase
Putative radical SAM family enzyme in heat shock gene cluster, similarity with CPO of BS HemN-type {ECO:0000313|EMBL:AIY18121.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
PLM3_60_coex_sep16_scaffold_4113_11
unknown

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9982..10299
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4113_12
unknown

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comp(10206..10490)
DNA (285bp) protein (95aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_4113_13
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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10793..11515
DNA (723bp) protein (241aa)
Two component transcriptional regulator, winged helix family Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PWJ6_KRIFD
winged helix family two component transcriptional regulator
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADB33465.1}; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
PLM3_60_coex_sep16_scaffold_4113_14
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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11512..12012
DNA (501bp) protein (167aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
Putative two-component system sensor kinase Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2RG80_STRVP
histidine kinase
PLM3_60_coex_sep16_scaffold_4113_15
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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12002..12088
DNA (87bp) protein (29aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
Histidine kinase Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PWJ5_KRIFD
histidine kinase
Displaying 15 items

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