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PLM3_60_coex_sep16_scaffold_1027

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_1027_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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2..2770
DNA (2769bp) protein (923aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036D0D49
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87063.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_1027_2
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2846..4276
DNA (1431bp) protein (477aa)
Uncharacterized protein Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ET75_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETY82525.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
PLM3_60_coex_sep16_scaffold_1027_3
unknown

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comp(4357..4662)
DNA (306bp) protein (102aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1027_4
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5175..5927
DNA (753bp) protein (251aa)
ASPIC/UnbV domain protein Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LIQ2_SYNFM
ASPIC/UnbV domain-containing protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ABK17304.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
PLM3_60_coex_sep16_scaffold_1027_5
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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5989..7500
DNA (1512bp) protein (504aa)
PhoPQ-activated pathogenicity Tax=Rhizobium meliloti RepID=UPI0002DD1946
PhoPQ-activated pathogenicity-like protein PqaA type
PhoPQ-activated pathogenicity-related protein {ECO:0000313|EMBL:ABJ83405.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_1027_6
unknown

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7657..8265
DNA (609bp) protein (203aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1027_7
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(8325..9227)
DNA (903bp) protein (301aa)
Putative LmbE-like protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDH9_SINAD
LmbE-like protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
PLM3_60_coex_sep16_scaffold_1027_8
unknown

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comp(9328..9453)
DNA (126bp) protein (42aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1027_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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9902..10633
DNA (732bp) protein (244aa)
Cytochrome c, class I Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TG0_SOLUE
class I cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABJ87060.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_1027_10
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

10630..12324
DNA (1695bp) protein (565aa)
Pyrrolo-quinoline quinone Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TG1_SOLUE
pyrrolo-quinoline quinone
Pyrrolo-quinoline quinone {ECO:0000313|EMBL:ABJ87059.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_1027_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

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comp(12628..13887)
DNA (1260bp) protein (420aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01VV7_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_1027_12

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14119..15051
DNA (933bp) protein (311aa)
formamidopyrimidine-DNA glycosylase / DNA-(apurinic or apyrimidinic site) lyase (EC:3.2.2.23 4.2.99.18)
Putative fapy-DNA glycosylase Tax=uncultured bacterium 98 RepID=E3T6L1_9BACT
Putative fapy-DNA glycosylase {ECO:0000313|EMBL:ADC35954.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium 98.;"
PLM3_60_coex_sep16_scaffold_1027_13
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

15156..16100
DNA (945bp) protein (315aa)
Transcriptional regulator, MerR family Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01V93_SOLUE
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABJ86422.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_1027_14
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(16309..16824)
DNA (516bp) protein (172aa)
serine phosphatase bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_coex_sep16_scaffold_1027_15
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

16830..18323
DNA (1494bp) protein (498aa)
Radical SAM family Fe-S protein Tax=uncultured bacterium 270 RepID=E3T6T8_9BACT
radical SAM protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_1027_16
BJP_IG2069_Desfulfarculales_53_13, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18406..20100
DNA (1695bp) protein (565aa)
TPR repeat Tax=Nitrosospira sp. APG3 RepID=M5DRB5_9PROT
hypothetical protein
Tax=BJP_IG2069_Desfulfarculales_53_13
PLM3_60_coex_sep16_scaffold_1027_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

20120..21037
DNA (918bp) protein (306aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020P9_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_1027_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

21034..21693
DNA (660bp) protein (220aa)
dihydroorotase (EC:3.5.2.3)
Dihydroorotase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020P9_SOLUE
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_1027_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21734..22309
DNA (576bp) protein (192aa)
Putative uncharacterized protein Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LKW7_CHLTF
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_coex_sep16_scaffold_1027_20
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

22651..23010
DNA (360bp) protein (120aa)
Anti-sigma factor antagonist Tax=uncultured Acidobacteria bacterium RepID=Q7X2W5_9BACT
anti-anti-sigma factor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_1027_21
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

23039..23590
DNA (552bp) protein (184aa)
hypothetical protein Tax=Arenimonas oryziterrae RepID=UPI0003B57AF9
hypothetical protein
Tax=CG_Anaero_04
PLM3_60_coex_sep16_scaffold_1027_22
BJP_IG2102_Elusimicrobia_52_42, Elusimicrobia lineage II, Elusimicrobia, Bacteria

Not on your lists

23587..24324
DNA (738bp) protein (246aa)
Putative uncharacterized protein Tax=Pseudoxanthomonas spadix (strain BD-a59) RepID=G7UW09_PSEUP
hypothetical protein
Tax=BJP_IG2102_Elusimicrobia_52_42
PLM3_60_coex_sep16_scaffold_1027_23
unknown

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24401..25018
DNA (618bp) protein (206aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1027_24

Not on your lists

comp(25058..25720)
DNA (663bp) protein (221aa)
Transcriptional regulator Tax=uncultured bacterium RepID=L7Y6Q0_9BACT
Transcriptional regulator {ECO:0000313|EMBL:AGD93302.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
regulatory protein TetR
PLM3_60_coex_sep16_scaffold_1027_25
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25820..26908
DNA (1089bp) protein (363aa)
Dehydrogenase/reductase (SDR family) member Tax=Sorangium cellulosum (strain So ce56) RepID=A9GVQ6_SORC5
short chain dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_1027_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(26764..28131)
DNA (1368bp) protein (456aa)
Ser/Thr protein phosphatase family protein Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTE7_9GAMM
metallophosphoesterase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_1027_27
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

28254..30683
DNA (2430bp) protein (810aa)
spermine synthase bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
spermine synthase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_1027_28
unknown

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comp(30905..31177)
DNA (273bp) protein (91aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_1027_29
unknown

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31491..32435
DNA (945bp) protein (315aa)

This feature has no annotations

Displaying 29 items

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