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PLM3_60_coex_sep16_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_98_1
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

1..177
DNA (177bp) protein (59aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM14_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_98_2
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

555..767
DNA (213bp) protein (71aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM14_9BACT
IS1 transposase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_98_3
unknown

Not on your lists

785..1015
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_98_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

1286..2974
DNA (1689bp) protein (563aa)
Nitrogenase (Molybdenum-iron)-specific transcriptional regulator NifA Tax=Cystobacter fuscus DSM 2262 RepID=S9PL86_9DELT
Nif-specific regulatory protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
PLM3_60_coex_sep16_scaffold_98_5
unknown

Not on your lists

3152..3820
DNA (669bp) protein (223aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_98_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3851..6235
DNA (2385bp) protein (795aa)
Uncharacterized protein Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4L1_MYXSD
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PLM3_60_coex_sep16_scaffold_98_7
unknown

Not on your lists

comp(6356..6586)
DNA (231bp) protein (77aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_98_8

Not on your lists

comp(7067..8395)
DNA (1329bp) protein (443aa)
oxidoreductase domain-containing protein bin=CNBR_ACIDO species=Mariniradius saccharolyticus genus=Mariniradius taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48736.1}; species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
oxidoreductase domain-containing protein
PLM3_60_coex_sep16_scaffold_98_9
Opitutaceae bacterium TAV5, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

8500..8838
DNA (339bp) protein (113aa)
L-rhamnose mutarotase {ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|SAAS:SAAS00169483};; species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV5.;"
L-rhamnose mutarotase Tax=unclassified Opitutaceae RepID=H1IPG2_9BACT
L-rhamnose mutarotase
PLM3_60_coex_sep16_scaffold_98_10
Alicyclobacillus hesperidum, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

8926..9714
DNA (789bp) protein (263aa)
Myo-inositol catabolism IolB domain-containing protein Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9HM30_9BACL
iolB; Myo-inositol catabolism IolB domain-containing protein
Myo-inositol catabolism IolB domain-containing protein {ECO:0000313|EMBL:EJY55143.1}; species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus hesperidum URH17-3-68.;"
PLM3_60_coex_sep16_scaffold_98_11
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

9901..10602
DNA (702bp) protein (234aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; K01625 2-dehydro-3-deoxyphosphogluconate aldolase / 4-hydroxy-2-oxoglutarate aldolase [EC:4.1.2.14 4.1.3.16] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_98_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

10608..11636
DNA (1029bp) protein (343aa)
PfkB domain-containing protein; K00874 2-dehydro-3-deoxygluconokinase [EC:2.7.1.45] bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ribokinase-like domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_98_13
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11745..12509
DNA (765bp) protein (255aa)
Putative serine esterase Tax=Cystobacter fuscus DSM 2262 RepID=S9Q323_9DELT
Putative serine esterase {ECO:0000313|EMBL:EPX55709.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_98_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

12588..13388
DNA (801bp) protein (267aa)
Uncharacterized protein Tax=Chthoniobacter flavus Ellin428 RepID=B4DBI2_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_98_15
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13378..13665)
DNA (288bp) protein (96aa)
Putative uncharacterized protein Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NM89_ROSCS
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43112.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_98_16
R_SM2F11_46_24, SM2F11, Bacteria

Not on your lists

13812..14741
DNA (930bp) protein (310aa)
alkaline phosphatase (EC:3.1.3.1)
sna:Snas_4283 metallophosphoesterase bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
Tax=RIFCSPHIGHO2_01_FULL_SM2F11_46_24_curated
PLM3_60_coex_sep16_scaffold_98_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(14785..15555)
DNA (771bp) protein (257aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036705D4
adenylate cyclase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_98_18
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(15584..16810)
DNA (1227bp) protein (409aa)
Spore coat assembly protein-like protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01ZB4_SOLUE
spore coat assembly protein-like protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
PLM3_60_coex_sep16_scaffold_98_19
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(16819..18258)
DNA (1440bp) protein (480aa)
Uncharacterized protein Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEL6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_98_20
Geobacter lovleyi, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18939..20609)
DNA (1671bp) protein (557aa)
MscS Mechanosensitive ion channel Tax=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) RepID=B3E1K0_GEOLS
mechanosensitive ion channel MscS
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:ACD94092.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ).;"
PLM3_60_coex_sep16_scaffold_98_21
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20738..21472)
DNA (735bp) protein (245aa)
6-phosphogluconolactonase Tax=Streptomyces vitaminophilus RepID=UPI00036FE504
6-phosphogluconolactonase
Tax=RBG_16_Deltaproteobacteria_71_12_curated
PLM3_60_coex_sep16_scaffold_98_22
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21720..22742
DNA (1023bp) protein (341aa)
Uncharacterized protein Tax=Photobacterium profundum RepID=Q6LG29_PHOPR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAG23751.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum (Photobacterium sp. (strain SS9)).;"
PLM3_60_coex_sep16_scaffold_98_23
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22791..23480
DNA (690bp) protein (230aa)
Uncharacterized protein Tax=Osedax symbiont Rs2 RepID=S6GPU8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ53982.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_98_24
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

23726..24589
DNA (864bp) protein (288aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000380B153
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_coex_sep16_scaffold_98_25
Nitrosococcus oceani, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24690..25634
DNA (945bp) protein (315aa)
Putative uncharacterized protein Tax=Nitrosococcus oceani RepID=Q3JA74_NITOC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA58272.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848).;"
PLM3_60_coex_sep16_scaffold_98_26
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25725..27551)
DNA (1827bp) protein (609aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_98_27
unknown

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27727..28044
DNA (318bp) protein (106aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_98_28

Not on your lists

comp(27995..30427)
DNA (2433bp) protein (811aa)
hypothetical protein Tax=unclassified Aminicenantes RepID=UPI000376A156
Uncharacterized protein {ECO:0000313|EMBL:KKN32126.1}; species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
BNR repeat-containing glycosyl hydrolase
PLM3_60_coex_sep16_scaffold_98_29
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(30478..30912)
DNA (435bp) protein (145aa)
NUDIX hydrolase Tax=Serinicoccus profundi RepID=UPI000255E80F
NUDIX hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_98_30
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31009..31566
DNA (558bp) protein (186aa)
Outer membrane lipoprotein (Lipocalin) protein Tax=Herbaspirillum seropedicae (strain SmR1) RepID=D8IZ45_HERSS
blc; outer membrane lipoprotein
Outer membrane lipoprotein (Lipocalin) protein {ECO:0000313|EMBL:ADJ66249.1}; species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae (strain SmR1).;"
Displaying items 1-30 of 42 in total

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