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PLM3_60_coex_sep16_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_138_1
R_OP11_Woesebacteria_44_14, Woesebacteria, Microgenomates, Bacteria

Not on your lists

3..176
DNA (174bp) protein (58aa)
Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_14_curated
PLM3_60_coex_sep16_scaffold_138_2
unknown

Not on your lists

242..949
DNA (708bp) protein (236aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_138_3
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists

comp(756..1298)
DNA (543bp) protein (181aa)
hypothetical protein bin=bin8_Chloro species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Crenarchaeota tax=bin8_Chloro organism_group=Chloroflexi
CHRD domain-containing protein
Tax=CSP1_4_Chloroflexi
PLM3_60_coex_sep16_scaffold_138_4
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1340..3703)
DNA (2364bp) protein (788aa)
Uncharacterized protein Tax=Sorangium cellulosum So0157-2 RepID=S4Y6E6_SORCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP40021.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum So0157-2.;"
PLM3_60_coex_sep16_scaffold_138_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4196..6574
DNA (2379bp) protein (793aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D814_SINAD
Uncharacterized protein {ECO:0000313|EMBL:AGA25549.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_138_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6571..7905
DNA (1335bp) protein (445aa)
Uncharacterized protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9K5_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25550.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_60_coex_sep16_scaffold_138_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7912..9459
DNA (1548bp) protein (516aa)
Ankyrin repeat-containing protein Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA78_SINAD
ankyrin repeat-containing protein
Ankyrin repeat-containing protein {ECO:0000313|EMBL:AGA25551.1}; species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
PLM3_60_coex_sep16_scaffold_138_8
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

9747..14276
DNA (4530bp) protein (1510aa)
hypothetical protein Tax=Aminicenantes bacterium SCGC AAA255-E10 RepID=UPI000382B3A2
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_138_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14290..15051)
DNA (762bp) protein (254aa)
hypothetical protein Tax=Spirosoma luteum RepID=UPI000366C3E6
Uncharacterized protein {ECO:0000313|EMBL:KJC60218.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
PLM3_60_coex_sep16_scaffold_138_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

15548..16738
DNA (1191bp) protein (397aa)
hypothetical protein Tax=Methylopila sp. M107 RepID=UPI000364DB89
FMN-dependent alpha-hydroxy acid dehydrogenase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
PLM3_60_coex_sep16_scaffold_138_11
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(17048..19687)
DNA (2640bp) protein (880aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X61_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_138_12
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

comp(19700..20038)
DNA (339bp) protein (113aa)
PadR family transcriptional regulator bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
transcriptional regulator, PadR-family
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_138_13
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20201..21850
DNA (1650bp) protein (550aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TA0_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_138_14
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

21850..22602
DNA (753bp) protein (251aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01TA0_SOLUE
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_138_15
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(22643..23224)
DNA (582bp) protein (194aa)
RNA polymerase, sigma-24 subunit, ECF subfamily Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01P44_SOLUE
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABJ88576.1}; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_138_16
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23327..25300
DNA (1974bp) protein (658aa)
Uncharacterized protein Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKB0_ANASK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACG74248.1}; Flags: Precursor;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter sp. (strain K).;"
PLM3_60_coex_sep16_scaffold_138_17
R_Acidobacteria_65_29, Acidobacteria, Bacteria

Not on your lists

25367..28294
DNA (2928bp) protein (976aa)
Serine/threonine protein kinase Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF6_SOLUE
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated
PLM3_60_coex_sep16_scaffold_138_18
GWC2_Geobacteraceae_55_20_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28741..30441
DNA (1701bp) protein (567aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
hypothetical protein Tax=Lamprocystis purpurea RepID=UPI000369B9CF
Tax=GWC2_Geobacteraceae_55_20_curated
PLM3_60_coex_sep16_scaffold_138_19
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

30457..31611
DNA (1155bp) protein (385aa)
Sensory box histidine kinase/response regulator Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MYC8_CORCM
rpfC; sensory box histidine kinase/response regulator
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
PLM3_60_coex_sep16_scaffold_138_20
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

32114..34597
DNA (2484bp) protein (828aa)
Putative uncharacterized protein Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01SF1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ87419.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
PLM3_60_coex_sep16_scaffold_138_21
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

comp(35042..35851)
DNA (810bp) protein (270aa)
hypothetical protein bin=GWB2_Elusimicrobium_63_22 species=Nostoc sp. genus=Nostoc taxon_order=Nostocales taxon_class=unknown phylum=Cyanobacteria tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
Tax=RBG_16_Acidobacteria_68_9_curated
PLM3_60_coex_sep16_scaffold_138_22
unknown

Not on your lists

comp(35870..36586)
DNA (717bp) protein (239aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_138_23
unknown

Not on your lists

comp(36602..37108)
DNA (507bp) protein (169aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_138_24
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(37242..37892)
DNA (651bp) protein (217aa)
Two component transcriptional regulator, LuxR family Tax=Pedosphaera parvula Ellin514 RepID=B9XB02_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF63187.1}; species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
response regulator
PLM3_60_coex_sep16_scaffold_138_25
Hymenobacter sp. APR13, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(37921..40848)
DNA (2928bp) protein (976aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter sp. APR13.;"
hypothetical protein Tax=Hymenobacter norwichensis RepID=UPI0003B3AE2C
hypothetical protein
PLM3_60_coex_sep16_scaffold_138_26
unknown

Not on your lists

comp(40845..41021)
DNA (177bp) protein (59aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_138_27
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(41178..41420)
DNA (243bp) protein (81aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B89E8
permease
Permease {ECO:0000313|EMBL:AHG87822.1}; species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
PLM3_60_coex_sep16_scaffold_138_28
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(41428..42597)
DNA (1170bp) protein (390aa)
hypothetical protein Tax=Rudaea cellulosilytica RepID=UPI00036446C7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16473.1}; species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
PLM3_60_coex_sep16_scaffold_138_29
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

42831..43709
DNA (879bp) protein (293aa)
hypothetical protein Tax=Dyella japonica RepID=UPI0002FCBC7A
AraC family transcriptional regulator {ECO:0000313|EMBL:KGM33852.1}; species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
AraC family transcriptional regulator
PLM3_60_coex_sep16_scaffold_138_30
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(43649..43837)
DNA (189bp) protein (63aa)
hypothetical protein Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036B89E8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ84487.1}; Flags: Precursor;; species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
Displaying items 1-30 of 40 in total

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