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PLM3_60_coex_sep16_scaffold_205

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
PLM3_60_coex_sep16_scaffold_205_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

1..261
DNA (261bp) protein (87aa)
hypothetical protein bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_205_2
unknown

Not on your lists

comp(684..1136)
DNA (453bp) protein (151aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_205_3
unknown

Not on your lists

comp(1177..1434)
DNA (258bp) protein (86aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_205_4
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1982..2233
DNA (252bp) protein (84aa)
Uncharacterized protein family UPF0150 domain protein Tax=mine drainage metagenome RepID=T1CTU1_9ZZZZ
putative protein family UPF0150
Tax=RBG_13_Deltaproteobacteria_61_14_curated
PLM3_60_coex_sep16_scaffold_205_5
unknown

Not on your lists

comp(2560..2754)
DNA (195bp) protein (65aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_205_6
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(3098..5107)
DNA (2010bp) protein (670aa)
Multimodular transpeptidase-transglycosylase bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
multimodular transpeptidase-transglycosylase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_7
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(5104..5847)
DNA (744bp) protein (248aa)
CDP-diacylglycerol-choline O-phosphatidyltransferase (EC:2.7.8.24)
CDP-diacylglycerol-choline O-phosphatidyltransferase Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM09_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_8
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

5902..7773
DNA (1872bp) protein (624aa)
ATP-dependent metalloprotease FtsH (EC:3.6.4.6)
ATP-dependent zinc metalloprotease FtsH Tax=Nitrospina gracilis 3/211 RepID=M1YLV5_9BACT
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_9
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

7888..10860
DNA (2973bp) protein (991aa)
Serine/threonine protein kinase Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEE9_CHLTF
serine/threonine protein kinase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_205_10
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(10939..13032)
DNA (2094bp) protein (698aa)
Serine/threonine protein kinase bin=GWA2_Ignavibacteria_55_11 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
serine/threonine protein kinase
Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
PLM3_60_coex_sep16_scaffold_205_11
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13239..15548
DNA (2310bp) protein (770aa)
Carboxylic ester hydrolase; EC=3.1.1.-;; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
Putative carboxylesterase Tax=Sorangium cellulosum (strain So ce56) RepID=A9FEC8_SORC5
carboxylesterase
PLM3_60_coex_sep16_scaffold_205_12
R_Acidobacteria_60_20, Acidobacteria, Bacteria

Not on your lists

15568..16563
DNA (996bp) protein (332aa)
OmpA/MotB domain protein Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFL5_9SPHI
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_60_20_curated
PLM3_60_coex_sep16_scaffold_205_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(16751..17005)
DNA (255bp) protein (85aa)
id=12556159 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_14
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17132..21721
DNA (4590bp) protein (1530aa)
DEAD/H associated domain protein Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8J717_ANAD2
DEAD/H associated domain protein {ECO:0000313|EMBL:ACL65207.1}; species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
DEAD/DEAH box helicase
PLM3_60_coex_sep16_scaffold_205_15
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21857..22267
DNA (411bp) protein (137aa)
Tax=GWA2_Deltaproteobacteria_45_12_curated
PLM3_60_coex_sep16_scaffold_205_16
unknown

Not on your lists

22824..23243
DNA (420bp) protein (140aa)

This feature has no annotations

PLM3_60_coex_sep16_scaffold_205_17
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(23341..25518)
DNA (2178bp) protein (726aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
MrcB; membrane carboxypeptidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_18
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(25646..27124)
DNA (1479bp) protein (493aa)
formate dehydrogenase family accessory protein FdhD; K02379 FdhD protein bin=CNBR_ACIDO species=Gemmata obscuriglobus genus=Gemmata taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
formate dehydrogenase family accessory protein FdhD
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_19
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(27181..28155)
DNA (975bp) protein (325aa)
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine ammonia-lyase Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EB18_9FIRM
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_20
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

comp(28152..29294)
DNA (1143bp) protein (381aa)
Hypothetical protein CBG24261 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
putative endoribonuclease L-PSP
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_21
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

29450..30445
DNA (996bp) protein (332aa)
hypothetical protein bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
PLM3_60_coex_sep16_scaffold_205_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

30472..32286
DNA (1815bp) protein (605aa)
amidase bin=RBG_16_Aminicenantes_66_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=RBG_16_Aminicenantes_66_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
amidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
PLM3_60_coex_sep16_scaffold_205_23
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32422..33870)
DNA (1449bp) protein (483aa)
Uncharacterized protein Tax=Fulvivirga imtechensis AK7 RepID=L8JTK5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR72306.1}; species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
peptidase M56 BlaR1
Displaying 23 items

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